Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 RNU6-514P-201ENST00000384208 107 ntBASIC4.18□□□□□ -1.74
U3KQE9 RNU6-17P-201ENST00000384245 107 ntBASIC4.18□□□□□ -1.74
U3KQE9 RNU6-18P-201ENST00000384527 107 ntBASIC4.18□□□□□ -1.74
U3KQE9 SNORA48.4-201ENST00000391089 134 ntBASIC4.18□□□□□ -1.74
U3KQE9 SNORA40C-201ENST00000391285 128 ntBASIC4.18□□□□□ -1.74
U3KQE9 RNU6-394P-201ENST00000410735 107 ntBASIC4.18□□□□□ -1.74
U3KQE9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.18□□□□□ -1.74
U3KQE9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 MTCO1P39-201ENST00000426148 480 ntBASIC4.18□□□□□ -1.74
U3KQE9 AL359073.1-201ENST00000448036 403 ntBASIC4.18□□□□□ -1.74
U3KQE9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.18□□□□□ -1.74
U3KQE9 U8.22-201ENST00000459141 133 ntBASIC4.18□□□□□ -1.74
U3KQE9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.18□□□□□ -1.74
U3KQE9 AC010265.1-201ENST00000513509 211 ntBASIC4.18□□□□□ -1.74
U3KQE9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.18□□□□□ -1.74
U3KQE9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.18□□□□□ -1.74
U3KQE9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.18□□□□□ -1.74
U3KQE9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.18□□□□□ -1.74
U3KQE9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.18□□□□□ -1.74
U3KQE9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.18□□□□□ -1.74
U3KQE9 MRPS21P7-201ENST00000566937 238 ntBASIC4.18□□□□□ -1.74
U3KQE9 MIR3921-201ENST00000577308 85 ntBASIC4.18□□□□□ -1.74
U3KQE9 FAM60BP-201ENST00000578364 658 ntBASIC4.18□□□□□ -1.74
U3KQE9 MIR4423-201ENST00000580922 80 ntBASIC4.18□□□□□ -1.74
U3KQE9 AC012616.1-201ENST00000600294 197 ntBASIC4.18□□□□□ -1.74
U3KQE9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 CU639417.4-201ENST00000623928 207 ntBASIC4.18□□□□□ -1.74
U3KQE9 SCARNA4-202ENST00000625402 129 ntBASIC4.18□□□□□ -1.74
U3KQE9 U4.7-201ENST00000638126 106 ntBASIC4.18□□□□□ -1.74
U3KQE9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 AC022893.2-201ENST00000564832 3296 ntBASIC4.18□□□□□ -1.74
U3KQE9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
U3KQE9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
U3KQE9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
U3KQE9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 AC099654.2-201ENST00000433031 1980 ntBASIC4.17□□□□□ -1.74
U3KQE9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
U3KQE9 RNU6-47P-201ENST00000383866 107 ntBASIC4.17□□□□□ -1.74
U3KQE9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.17□□□□□ -1.74
U3KQE9 MIR153-1-201ENST00000384914 90 ntBASIC4.17□□□□□ -1.74
U3KQE9 SNORA46.1-201ENST00000391069 153 ntBASIC4.17□□□□□ -1.74
U3KQE9 RNU1-139P-201ENST00000391307 165 ntBASIC4.17□□□□□ -1.74
U3KQE9 MIR1290-201ENST00000408735 78 ntBASIC4.17□□□□□ -1.74
U3KQE9 RNU2-20P-201ENST00000410425 191 ntBASIC4.17□□□□□ -1.74
U3KQE9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.17□□□□□ -1.74
U3KQE9 RPL7AP49-201ENST00000429522 581 ntBASIC4.17□□□□□ -1.74
U3KQE9 AL591438.1-201ENST00000433508 581 ntBASIC4.17□□□□□ -1.74
U3KQE9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.17□□□□□ -1.74
U3KQE9 Z82188.1-201ENST00000436709 154 ntBASIC4.17□□□□□ -1.74
U3KQE9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.17□□□□□ -1.74
U3KQE9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 Y_RNA.638-201ENST00000459374 113 ntBASIC4.17□□□□□ -1.74
U3KQE9 AP001324.2-201ENST00000461163 319 ntBASIC4.17□□□□□ -1.74
U3KQE9 Y_RNA.679-201ENST00000516416 91 ntBASIC4.17□□□□□ -1.74
U3KQE9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.17□□□□□ -1.74
U3KQE9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.17□□□□□ -1.74
U3KQE9 AC108738.1-201ENST00000603703 237 ntBASIC4.17□□□□□ -1.74
U3KQE9 AC011921.3-201ENST00000605540 361 ntBASIC4.17□□□□□ -1.74
U3KQE9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 ABCC13-202ENST00000463099 3842 ntBASIC4.17□□□□□ -1.74
U3KQE9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 AC233981.2-201ENST00000611524 1614 ntBASIC4.17□□□□□ -1.74
U3KQE9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
U3KQE9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.17□□□□□ -1.74
U3KQE9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
U3KQE9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms