Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 OR4T1P-201ENST00000554933 911 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 MIR548S-201ENST00000581352 82 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AP000907.4-201ENST00000604143 237 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 Z84480.1-201ENST00000605131 311 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC006065.5-201ENST00000623427 349 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AL008636.1-201ENST00000625038 1018 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AL138713.1-201ENST00000624026 2130 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC244517.1-201ENST00000606030 2086 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC068647.1-201ENST00000489539 2265 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 OR5J1P-201ENST00000313544 939 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 FTLP6-201ENST00000355274 422 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RNU4-1-201ENST00000363925 141 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RNU6-637P-201ENST00000384050 107 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RNU6-780P-201ENST00000391030 104 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RHEBP3-201ENST00000411920 351 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 MTATP6P18-201ENST00000417994 673 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 BEND7P1-201ENST00000422058 457 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 MTCO2P19-201ENST00000427513 598 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 U3.44-201ENST00000458938 192 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 snoU13.3-201ENST00000459441 104 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 FCF1P3-201ENST00000496394 590 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 ARL4AP2-201ENST00000507378 601 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC026801.2-201ENST00000515352 425 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 Y_RNA.693-201ENST00000516641 110 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 RNU6-410P-201ENST00000517006 107 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AP006245.1-201ENST00000522549 120 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC026333.2-201ENST00000542164 106 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC025678.1-201ENST00000567861 338 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 MIR4325-201ENST00000583049 90 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL391646.1-201ENST00000603860 190 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL136363.1-201ENST00000605349 337 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC008536.2-201ENST00000607284 349 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC017083.3-201ENST00000609955 700 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AL355365.1-201ENST00000616480 294 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 AC009161.2-201ENST00000624626 138 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.54□□□□□ -1.84
RAI2Q9Y5P3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 RNU6-877P-201ENST00000383868 107 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 U3.19-201ENST00000390893 196 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 RNU6-712P-201ENST00000410558 100 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 MTCO1P20-201ENST00000425366 358 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 ATP5JP1-201ENST00000431631 322 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 NFU1P2-201ENST00000448700 469 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 KC877373.1-201ENST00000479066 408 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC106872.2-201ENST00000494303 480 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC093278.1-201ENST00000494700 600 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC020893.1-201ENST00000502452 580 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AC114797.1-201ENST00000514003 728 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 RNU4-60P-201ENST00000517239 135 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 OR4R1P-201ENST00000529879 463 ntBASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.53□□□□□ -1.84
RAI2Q9Y5P3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms