Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SNORA40.12-201ENST00000516329 111 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MIR2114-201ENST00000516645 80 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP471-201ENST00000516971 106 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-685P-201ENST00000517088 95 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC103843.2-201ENST00000530523 682 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC008752.3-201ENST00000588113 712 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC022893.3-201ENST00000607665 437 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC012409.4-201ENST00000612923 249 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC066616.2-201ENST00000559334 1481 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AP001148.1-201ENST00000624124 2359 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 ELF2P3-201ENST00000445099 1506 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-512P-201ENST00000364438 103 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 SNORA62.3-201ENST00000365110 153 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU4-12P-201ENST00000365233 139 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-483P-201ENST00000384088 108 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 MTCYBP5-201ENST00000423752 1135 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC006946.1-201ENST00000429106 328 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 COX6B1P7-201ENST00000430845 235 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RPL23AP69-201ENST00000431134 458 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 MTATP6P13-201ENST00000438531 667 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 DPPA3P1-201ENST00000448050 469 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AL500522.2-201ENST00000448562 343 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-420P-201ENST00000458780 107 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 snoU13.22-201ENST00000459428 104 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-261P-201ENST00000459506 102 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RN7SL93P-201ENST00000463035 293 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AL121769.1-201ENST00000469473 401 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AL163973.1-201ENST00000484753 577 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC104806.1-201ENST00000508720 308 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC099522.1-202ENST00000514718 367 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP519-201ENST00000516480 119 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AL121576.1-201ENST00000556055 276 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC022655.2-201ENST00000577280 318 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 MTATP6P3-201ENST00000581686 676 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC053481.4-201ENST00000583164 216 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 BNIP3P9-201ENST00000603714 553 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 RNU4-89P-201ENST00000607443 133 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC093788.1-201ENST00000609356 927 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC130324.3-201ENST00000614165 542 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 MIR6076-201ENST00000617521 113 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AL354950.2-201ENST00000617939 290 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 AC006020.1-201ENST00000420179 1854 ntBASIC3.2□□□□□ -1.9
LSM4Q9Y4Z0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms