Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL513331.1-201ENST00000411908 397 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RPL7P8-201ENST00000411964 730 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RPL17P12-201ENST00000413391 526 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 USP9YP26-201ENST00000421008 661 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RPL7P46-201ENST00000425129 740 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RPL37P21-201ENST00000435890 276 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LARP1BP3-201ENST00000437229 869 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 BNIP3P2-201ENST00000441221 577 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 MTCO3P45-201ENST00000443036 613 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC093392.2-201ENST00000450682 337 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 SNRPGP6-201ENST00000451124 220 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AL135752.1-201ENST00000479477 471 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AF131216.2-201ENST00000512316 564 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 TTC39CP1-201ENST00000512513 755 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RN7SKP282-201ENST00000516824 299 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 PCMTD1P2-201ENST00000565017 355 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AF038458.1-201ENST00000588406 262 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC078899.3-201ENST00000599065 212 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC068790.3-201ENST00000602988 553 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC012150.2-201ENST00000621300 544 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AC079248.2-201ENST00000623779 326 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 PABPC1P9-201ENST00000426076 1612 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-920P-201ENST00000410926 92 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 RN7SKP58-201ENST00000411010 305 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AL451054.2-201ENST00000420896 202 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC129850.1-201ENST00000436203 508 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 GDI2P2-201ENST00000445131 608 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 RPL23AP41-201ENST00000484754 458 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC011825.1-201ENST00000484967 388 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC005178.1-201ENST00000508392 440 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-390P-201ENST00000516259 103 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 SNORA31.21-201ENST00000517180 77 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 SNORA31.26-201ENST00000517250 137 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC100870.1-201ENST00000522035 505 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 MTND4LP18-201ENST00000526864 291 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AP002748.2-201ENST00000528671 348 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC007038.2-201ENST00000608095 740 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 OR10AB1P-201ENST00000609613 938 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC135507.2-201ENST00000612443 309 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC122133.1-201ENST00000613964 233 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 SDR42E1P2-201ENST00000614861 481 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC010133.1-201ENST00000615809 842 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 LRRC77P-213ENST00000637727 880 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AC006927.3-201ENST00000638789 384 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 AL445523.1-201ENST00000451184 1362 ntBASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4BQ9Y4P1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-553P-201ENST00000364047 96 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-198P-201ENST00000384258 104 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 MIR19A-201ENST00000384878 82 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 UBA52P6-201ENST00000399822 382 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 MTCYBP36-201ENST00000404146 440 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms