Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPS15AP38-201ENST00000413110 372 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC016691.1-201ENST00000441321 413 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AL034418.1-201ENST00000448675 860 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 RPL12P25-201ENST00000455592 494 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 snoU13.23-201ENST00000458863 104 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC021146.7-201ENST00000509604 775 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AC118273.2-201ENST00000532092 465 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AL391813.2-201ENST00000609113 322 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 TUG1_1.1-201ENST00000610654 145 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 AL773524.1-201ENST00000614065 229 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 MTND5P28-201ENST00000438005 1594 ntBASIC0.96□□□□□ -2.26
UBE2D4Q9Y2X8 Y_RNA.140-201ENST00000363474 103 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 RNU1-148P-201ENST00000384472 162 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AL356131.1-201ENST00000405826 414 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC244453.4-201ENST00000419150 388 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 OFD1P18Y-201ENST00000420889 959 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC246680.2-201ENST00000422106 389 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC244035.1-201ENST00000430042 390 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 DNAJC19P4-201ENST00000440115 345 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 TPTE2P6-202ENST00000445572 1007 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 OR52A4P-202ENST00000481634 799 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC093801.2-201ENST00000503966 1050 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC015720.1-201ENST00000565251 277 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AL355877.2-201ENST00000603670 358 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC073111.2-201ENST00000605657 1075 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AL354950.1-201ENST00000614150 568 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 AC006338.1-201ENST00000618453 749 ntBASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBE2D4Q9Y2X8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 RNU4-13P-201ENST00000364019 141 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-60P-201ENST00000364792 103 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-203P-201ENST00000384038 104 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-76P-201ENST00000384060 104 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC079780.1-201ENST00000428259 207 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 EZH2P1-201ENST00000431167 291 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 NDUFB4P6-201ENST00000436819 366 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AL121601.2-201ENST00000438019 707 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AL714022.1-201ENST00000439897 151 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC007677.1-201ENST00000445757 515 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 HMGN2P10-201ENST00000448085 265 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC116337.2-201ENST00000477662 156 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC109464.2-201ENST00000510242 943 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC008834.1-201ENST00000511612 175 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 TRAV11-201ENST00000539512 339 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC068338.1-201ENST00000565567 176 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 AC009977.1-201ENST00000586015 570 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 SEPT7P9-203ENST00000604116 343 ntBASIC0.94□□□□□ -2.26
UBE2D4Q9Y2X8 ZNF72P-201ENST00000425869 1908 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-482P-201ENST00000391068 107 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC006548.1-201ENST00000427470 102 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC093106.2-201ENST00000428212 385 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 ZYG11AP1-201ENST00000430329 837 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC015922.2-201ENST00000435593 184 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AP000949.1-201ENST00000438328 629 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 MTND4LP3-201ENST00000468320 276 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC091917.2-201ENST00000505002 744 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-1004P-201ENST00000516584 111 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 RNU6-1308P-201ENST00000516817 103 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 RN7SKP219-201ENST00000516825 296 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 HMGB1P14-201ENST00000557424 591 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 AC015712.3-201ENST00000559380 164 ntBASIC0.93□□□□□ -2.26
UBE2D4Q9Y2X8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms