Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP000254.1-201ENST00000609934 520 ntBASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 AC099654.7-201ENST00000635788 2127 ntBASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 AC103706.2-201ENST00000638080 240 ntBASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.4□□□□□ -2.03
TRAPPC4Q9Y296 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 MTCO1P17-201ENST00000411522 491 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 NDUFB4P6-201ENST00000436819 366 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LSM1P1-201ENST00000438629 273 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 MTCYBP3-201ENST00000445588 1137 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 HSPE1P6-201ENST00000479457 291 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC104685.1-201ENST00000502445 371 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC006445.2-201ENST00000510061 472 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL359273.1-201ENST00000510918 627 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 OR5BN1P-201ENST00000532955 829 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 UBE2L4-201ENST00000587688 464 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 RPL23AP78-201ENST00000599928 470 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC068313.1-201ENST00000604028 1008 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC004067.1-201ENST00000608733 700 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC072039.2-201ENST00000608883 439 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC079395.3-201ENST00000615161 484 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL158801.5-201ENST00000623123 465 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL356596.1-201ENST00000624230 379 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC007490.1-201ENST00000624321 703 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC006386.2-201ENST00000624491 75 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC012005.1-201ENST00000624575 75 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 AC009902.3-201ENST00000606235 2172 ntBASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRAPPC4Q9Y296 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RNA5SP88-201ENST00000365560 109 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-637P-201ENST00000384050 107 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-1200P-201ENST00000384162 107 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 SNORA36C-201ENST00000384289 132 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-114P-201ENST00000384704 105 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 U3.20-201ENST00000390909 217 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC119751.3-201ENST00000399720 670 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 NDUFB4P4-201ENST00000404822 243 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 MIR1305-201ENST00000408300 86 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 MIR1290-201ENST00000408735 78 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 MTND1P21-201ENST00000412991 285 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AL592148.1-201ENST00000413568 445 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 BX682237.1-201ENST00000415016 335 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC019097.1-201ENST00000424783 735 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC063976.3-201ENST00000426849 329 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 UBE2FP3-201ENST00000436366 524 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AL592447.1-201ENST00000447592 540 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC034222.1-201ENST00000494052 532 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 SEM1P1-201ENST00000506694 209 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC022447.3-201ENST00000506865 495 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC107222.1-201ENST00000510899 637 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RAC1P5-201ENST00000512182 576 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC112673.1-201ENST00000513168 575 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 RN7SKP287-201ENST00000516546 266 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC087276.1-201ENST00000529659 480 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC068587.4-201ENST00000533893 186 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC005832.2-201ENST00000538921 1430 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC002400.1-201ENST00000569310 726 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 VN1R90P-201ENST00000595717 726 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AC093424.1-201ENST00000604999 338 ntBASIC2.38□□□□□ -2.03
TRAPPC4Q9Y296 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms