Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL358472.1-201ENST00000431295 329 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AL389915.2-201ENST00000454576 441 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 snoU13.7-201ENST00000459220 104 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 RPS27AP13-201ENST00000498403 237 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 RN7SKP164-201ENST00000516138 266 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 TRAV37-201ENST00000553906 342 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC023575.1-201ENST00000580510 358 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC024153.1-201ENST00000603103 365 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC108081.1-201ENST00000604358 221 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
TRIM35Q9UPQ4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-961P-201ENST00000363893 105 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-294P-201ENST00000364999 102 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-213P-201ENST00000384051 104 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 MIR223-201ENST00000385204 110 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 MIR105-1-201ENST00000385222 81 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RNU2-22P-201ENST00000411266 212 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RPL7AP49-201ENST00000429522 581 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AL591438.1-201ENST00000433508 581 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RPS15AP5-201ENST00000436276 388 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AL121594.1-201ENST00000475906 575 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RN7SL814P-201ENST00000487715 300 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-1114P-201ENST00000516022 107 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC008694.2-201ENST00000517591 306 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC100767.1-201ENST00000528178 123 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC074101.1-201ENST00000637861 241 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 AC069528.2-201ENST00000624849 1991 ntBASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TRIM35Q9UPQ4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 RNA5SP391-201ENST00000363456 119 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 U8.4-201ENST00000363626 134 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-103P-201ENST00000363686 107 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 RNU1-106P-201ENST00000384382 164 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AC009296.1-201ENST00000443146 155 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AC005042.3-201ENST00000453230 174 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 RN7SL515P-201ENST00000463999 297 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 RPL23AP45-201ENST00000476406 468 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AC006499.3-201ENST00000506077 748 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 NACAP3-201ENST00000552100 481 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AP005432.2-201ENST00000608162 586 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 SCARNA4-201ENST00000629045 128 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 AP001642.1-201ENST00000624727 2117 ntBASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TRIM35Q9UPQ4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 TTC41P-205ENST00000551270 3963 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 RPL23P2-201ENST00000320371 421 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 MIR450A1-201ENST00000362262 91 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 SNORA25.7-201ENST00000364375 127 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 RNA5SP90-201ENST00000364801 99 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 RNU6-968P-201ENST00000384076 107 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 MIR589-201ENST00000385238 99 ntBASIC6.87□□□□□ -1.31
TRIM35Q9UPQ4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms