Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC012493.2-201ENST00000595083 291 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL161734.1-201ENST00000609720 557 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL590282.1-201ENST00000610379 1136 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 U6.98-201ENST00000637157 84 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 ELF2P3-201ENST00000445099 1506 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC116096.1-201ENST00000566804 2314 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 SNORA38.1-201ENST00000364172 131 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 Y_RNA.248-201ENST00000364501 109 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RNU6-1283P-201ENST00000365314 105 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 SNORA7.4-201ENST00000384249 137 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 MIR181A1-201ENST00000385026 110 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 MTCO3P40-201ENST00000392516 676 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RNU2-8P-201ENST00000410727 190 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC233728.2-201ENST00000425348 757 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 MTCO2P11-201ENST00000431069 680 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 MRPS10P2-201ENST00000431226 381 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 SETP5-201ENST00000437270 562 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC006028.1-201ENST00000438379 402 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 PSPHP1-201ENST00000450062 261 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC013267.1-201ENST00000458227 267 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL121769.1-201ENST00000469473 401 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RNU1-143P-201ENST00000516296 146 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RN7SKP57-201ENST00000517248 293 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 CR383656.7-201ENST00000548164 174 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 OR4T1P-201ENST00000554933 911 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL845331.3-202ENST00000562856 261 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC011451.2-201ENST00000604303 598 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 U1.23-201ENST00000610293 146 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 RNU1-68P-201ENST00000615382 146 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC073534.2-201ENST00000620377 381 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 MIR8057-201ENST00000620957 69 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 U1.39-201ENST00000621562 146 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL359880.1-201ENST00000621879 266 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AL356585.4-201ENST00000623078 1229 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC018692.3-201ENST00000623929 123 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX4Q9UIU6 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
SIX4Q9UIU6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC138915.3-201ENST00000562908 1389 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 RNU6-181P-201ENST00000363225 107 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 RNU4-12P-201ENST00000365233 139 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 SNORD115-47-201ENST00000391226 86 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 BTF3P7-201ENST00000407097 488 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC007390.1-201ENST00000415722 356 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC073464.1-201ENST00000429823 534 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC119618.1-201ENST00000434191 222 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL596276.1-201ENST00000434465 418 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 MTND4LP10-201ENST00000435146 291 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 TIMM9P1-201ENST00000436122 256 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 MTCO2P3-201ENST00000442543 421 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL136097.1-201ENST00000456945 913 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms