Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC099654.7-201ENST00000635788 2127 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC099786.3-201ENST00000565735 1410 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 RNU4-68P-201ENST00000364314 141 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 HMGN2P35-201ENST00000412164 270 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL008987.1-201ENST00000415528 237 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL031779.1-201ENST00000415663 330 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 MTND1P20-201ENST00000430341 950 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AIG1P1-201ENST00000503376 148 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC017037.2-201ENST00000513850 890 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 RNU4-29P-201ENST00000515943 174 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 NBEAP1-201ENST00000554452 979 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AL355836.1-201ENST00000555951 870 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 MTCYBP33-201ENST00000575007 1130 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 MIR3605-201ENST00000583214 100 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC061975.8-201ENST00000587058 721 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AP000787.2-201ENST00000604432 568 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC122108.2-201ENST00000611946 526 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 MIR6130-201ENST00000619419 109 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC231657.1-201ENST00000624313 397 ntBASIC3.14□□□□□ -1.91
CLIP2Q9UDT6 AC087359.1-201ENST00000508335 1740 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL022578.1-201ENST00000439330 1433 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 RNU4-92P-201ENST00000363783 136 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 RNU6-952P-201ENST00000391164 108 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC090960.1-201ENST00000421072 306 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 HMGN2P30-201ENST00000423237 256 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL445567.1-201ENST00000439121 144 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC005410.1-202ENST00000460347 485 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 SETP11-201ENST00000473027 690 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 KC877373.1-201ENST00000479066 408 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL117351.2-201ENST00000513571 157 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 MTCO2P15-201ENST00000532655 656 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 MTND4P33-201ENST00000556706 766 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC080013.3-201ENST00000606839 578 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC013562.2-201ENST00000611632 603 ntBASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLIP2Q9UDT6 MTND4P4-201ENST00000439033 1366 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 Y_RNA.192-201ENST00000363977 102 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 RNU6-343P-201ENST00000364709 104 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 RNU6-359P-201ENST00000365466 108 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 SNORD116.1-201ENST00000365628 92 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 Y_RNA.465-201ENST00000384293 102 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 RPL23AP29-201ENST00000397284 453 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC119751.3-201ENST00000399720 670 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC011233.1-201ENST00000422812 283 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL139421.1-201ENST00000423010 169 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 LSM1P1-201ENST00000438629 273 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL133217.1-201ENST00000450980 425 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 RPL21P134-201ENST00000453468 483 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 MTND1P16-201ENST00000465177 898 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms