Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU4-48P-201ENST00000365559 182 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RNU6-606P-201ENST00000384721 111 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 RPS4XP8-201ENST00000402039 771 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RNU6-1077P-201ENST00000410506 102 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RNA5SP38-201ENST00000410750 119 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RPS12P24-201ENST00000412619 387 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 BTF3L4P3-201ENST00000418879 476 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 TIMM9P3-201ENST00000428659 274 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AL133547.1-201ENST00000448546 220 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 FABP5P15-201ENST00000453566 214 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC093899.1-201ENST00000457984 376 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RPL37P6-201ENST00000460682 294 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 RNA5SP290-201ENST00000517133 127 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 AP001893.2-201ENST00000526949 202 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC016957.1-201ENST00000534895 309 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 HIGD1AP1-201ENST00000550979 275 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AL360157.1-201ENST00000565962 87 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 MIR3609-201ENST00000582661 80 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC020914.4-201ENST00000597690 277 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC092794.1-201ENST00000612734 582 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AL359880.1-201ENST00000621879 266 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC025034.2-201ENST00000623264 286 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN1Q9P244 AC018555.1-201ENST00000567548 1980 ntBASIC3.65□□□□□ -1.83
LRFN1Q9P244 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN1Q9P244 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN1Q9P244 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LRFN1Q9P244 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN1Q9P244 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AL359693.1-201ENST00000614959 2407 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN1Q9P244 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN1Q9P244 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN1Q9P244 Y_RNA.245-201ENST00000364493 95 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 MTCO3P40-201ENST00000392516 676 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 RNU6-387P-201ENST00000411331 105 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC007390.1-201ENST00000415722 356 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 ELOCP14-201ENST00000428070 331 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AL591212.2-201ENST00000433923 257 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 RPL23AP83-201ENST00000434984 473 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 ELOCP7-201ENST00000439968 331 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 DDX3P2-201ENST00000446138 111 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 RN7SL585P-201ENST00000470538 280 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 RPL7P49-201ENST00000471402 708 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC006517.1-201ENST00000480485 328 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 RN7SL323P-201ENST00000494712 295 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 MIR2114-201ENST00000516645 80 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 CYCSP30-201ENST00000546447 172 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 MTATP6P3-201ENST00000581686 676 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC010591.1-201ENST00000603941 649 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC104662.1-201ENST00000604448 511 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC022893.3-201ENST00000607665 437 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC012409.4-201ENST00000612923 249 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 AC006111.3-201ENST00000622137 383 ntBASIC3.64□□□□□ -1.83
LRFN1Q9P244 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN1Q9P244 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN1Q9P244 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 ZNF680P1-201ENST00000436625 1469 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RNU6-288P-201ENST00000363690 104 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RNA5SP399-201ENST00000364003 117 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RNU6-1035P-201ENST00000384477 107 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 MIR30B-201ENST00000384850 88 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 FCF1P9-201ENST00000412546 282 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 JKAMPP1-201ENST00000413804 919 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 OR51A5P-201ENST00000415429 942 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 ZNF863P-201ENST00000426746 417 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 HSPD1P21-201ENST00000436541 245 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RPL23AP20-201ENST00000447965 421 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms