Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL591473.1-201ENST00000464297 313 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC108860.1-201ENST00000484521 383 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 RNU6-914P-201ENST00000516749 109 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 RNU7-4P-201ENST00000516961 62 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 RN7SL652P-201ENST00000577769 300 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC125232.2-201ENST00000592457 143 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AL160281.1-201ENST00000605307 311 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC004805.2-201ENST00000605382 482 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AC006065.5-201ENST00000623427 349 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTN3Q9P232 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 RNU6-76P-201ENST00000384060 104 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 MIR1302-6-201ENST00000408466 90 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 RNU6-1156P-201ENST00000410365 100 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 Y_RNA.625-201ENST00000411256 107 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL030996.1-201ENST00000411430 235 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC140479.3-201ENST00000418944 1126 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 BX276092.3-201ENST00000424182 230 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL158071.1-201ENST00000430315 461 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 HSFY6P-201ENST00000445573 403 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL031274.1-201ENST00000450334 232 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 RPS15AP34-201ENST00000487776 387 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC069499.1-201ENST00000489433 509 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC022447.4-201ENST00000504053 364 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC105758.1-201ENST00000506038 399 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 GMPSP1-201ENST00000514075 579 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 ACA59.1-201ENST00000515966 143 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC104576.1-201ENST00000524225 88 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC040926.1-201ENST00000530195 238 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 OR5D17P-201ENST00000531492 978 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 FKBP1BP1-201ENST00000553366 325 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 RPL23AP87-202ENST00000573039 466 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 LRRC37A5P-203ENST00000580181 585 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 MIR4273-201ENST00000582824 84 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 MIR548AC-201ENST00000585049 88 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AC015967.1-201ENST00000619893 476 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTN3Q9P232 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.11□□□□□ -1.59
CNTN3Q9P232 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTN3Q9P232 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTN3Q9P232 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTN3Q9P232 Y_RNA.350-201ENST00000365409 98 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 Y_RNA.551-201ENST00000384661 102 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RNA5SP397-201ENST00000391323 118 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AL445529.1-201ENST00000398713 389 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RN7SKP267-201ENST00000410381 285 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RNU6-607P-201ENST00000411283 108 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RPL36AP10-201ENST00000421785 322 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 UBE2D3P2-201ENST00000424409 445 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC133473.1-201ENST00000455173 299 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RNU6-1132P-201ENST00000459214 107 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 SNORD108-201ENST00000459332 71 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC083829.1-201ENST00000503756 657 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 SNRPGP16-201ENST00000533275 226 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC023157.2-201ENST00000540596 141 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC126177.3-201ENST00000551839 688 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 CYCSP40-201ENST00000575927 294 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 MIR5188-201ENST00000583467 113 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTN3Q9P232 SNORD91B-202ENST00000608459 222 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 MUC2-202ENST00000613187 4845 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC141273.2-201ENST00000618989 130 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AC078938.1-201ENST00000620993 318 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
CNTN3Q9P232 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms