Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC004263.1-201ENST00000479327 332 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 IGLV3-17-201ENST00000519099 244 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AP003122.3-201ENST00000526316 255 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC009097.3-201ENST00000563557 1018 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC069304.2-201ENST00000605154 435 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC026790.2-201ENST00000606282 430 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC013562.2-201ENST00000611632 603 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 RNU6-1192P-201ENST00000612197 107 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 RNU6-489P-201ENST00000618289 107 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 SNORA40.4-201ENST00000390971 128 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 HMGB1P11-201ENST00000413899 637 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC107081.1-201ENST00000414975 361 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC099548.1-201ENST00000421443 426 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 NDUFB4P7-201ENST00000423198 363 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC008850.1-201ENST00000427546 362 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 RNU6-1282P-201ENST00000516735 96 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC124947.2-202ENST00000552735 133 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC023824.2-201ENST00000566185 400 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC104072.1-201ENST00000568817 668 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 DNAJC19P3-201ENST00000594491 331 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 OR10AB1P-201ENST00000609613 938 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC093673.2-201ENST00000609674 331 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AC231657.1-201ENST00000624313 397 ntBASIC2.24□□□□□ -2.05
TREX1Q9NSU2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TREX1Q9NSU2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC006020.1-201ENST00000420179 1854 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 Y_RNA.408-201ENST00000383987 102 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 SNORA6-201ENST00000384033 151 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AL513331.1-201ENST00000411908 397 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 SEPT2P1-201ENST00000419651 180 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 PPP1R11P2-201ENST00000423543 382 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC093752.1-206ENST00000511823 336 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AP002748.2-201ENST00000528671 348 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC087276.1-201ENST00000529659 480 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 RPS15AP11-201ENST00000594193 385 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 BBIP1P1-201ENST00000602999 279 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC112220.2-201ENST00000605513 533 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC135507.1-201ENST00000607214 561 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC005332.10-201ENST00000612725 619 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC024257.5-201ENST00000612739 531 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 MIR6130-201ENST00000619419 109 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC093591.3-201ENST00000634516 308 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 MIR7515-201ENST00000637837 67 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 AL049641.1-201ENST00000441055 1948 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
TREX1Q9NSU2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 Y_RNA.234-201ENST00000364409 97 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 XGY1-201ENST00000381172 446 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 Y_RNA.548-201ENST00000384656 105 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 RNU4-72P-201ENST00000410754 173 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC068533.2-201ENST00000411872 306 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 TPMTP2-201ENST00000414372 726 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms