Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TPT1P14-201ENST00000448018 505 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 MTCO2P9-201ENST00000503214 694 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 KLRA1P-201ENST00000503499 986 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC109464.2-201ENST00000510242 943 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC098826.3-201ENST00000603823 466 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC011330.2-201ENST00000621680 635 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AL031601.2-202ENST00000622650 282 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC132825.7-201ENST00000638744 335 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CISHQ9NSE2 RNU6-883P-201ENST00000384597 107 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 MTCO2P31-201ENST00000402702 684 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 RNU2-43P-201ENST00000410306 190 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC099548.1-201ENST00000421443 426 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 BEND7P1-201ENST00000422058 457 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 CR848007.2-201ENST00000424918 787 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC007560.1-201ENST00000426912 237 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC241584.1-201ENST00000438469 1241 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC108734.3-201ENST00000481241 1165 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 FAM92A1P2-202ENST00000504766 877 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 RNU6-1282P-201ENST00000516735 96 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 MIR4298-201ENST00000584380 73 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC093838.1-201ENST00000613014 469 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AC010678.1-201ENST00000614118 713 ntBASIC1.84□□□□□ -2.11
CISHQ9NSE2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CISHQ9NSE2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 HMGB1P5-201ENST00000255320 642 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CISHQ9NSE2 RNU6-878P-201ENST00000384578 110 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 FCF1P2-201ENST00000415284 583 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 NDUFB4P7-201ENST00000423198 363 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 VN1R42P-201ENST00000424651 344 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AL356867.1-201ENST00000429623 299 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC048346.1-201ENST00000510247 144 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 RNA5SP135-201ENST00000517019 125 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 snoZ278.1-201ENST00000517059 112 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 CR383656.7-201ENST00000548164 174 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC008127.2-201ENST00000549925 1075 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC093519.1-201ENST00000566109 298 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC104581.2-201ENST00000572227 430 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC090132.2-201ENST00000615881 347 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC012150.2-201ENST00000621300 544 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AL512506.2-201ENST00000624472 458 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 AC241585.2-209ENST00000638217 143 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CISHQ9NSE2 DDX10P1-201ENST00000448545 1933 ntBASIC1.83□□□□□ -2.12
CISHQ9NSE2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CISHQ9NSE2 SNORD116-23-201ENST00000384645 92 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL512637.2-201ENST00000431287 1256 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL451074.3-201ENST00000437709 472 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 OSTCP8-201ENST00000445117 448 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 MTCO1P48-201ENST00000448024 1096 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 MTATP6P7-201ENST00000453315 681 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CISHQ9NSE2 RPL21P47-201ENST00000483696 477 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms