Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 BNIP3P11-201ENST00000603878 563 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AL139344.1-201ENST00000605228 195 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AC026741.1-201ENST00000605892 482 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 MIR6867-201ENST00000610636 67 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AL357080.1-201ENST00000617394 239 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 MIR6732-201ENST00000619365 60 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 AC079416.3-201ENST00000624479 549 ntBASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.07□□□□□ -2.24
CDC42SE1Q9NRR8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 SNORA71.1-201ENST00000364523 117 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AL359837.1-201ENST00000381357 287 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-171P-201ENST00000384354 107 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-955P-201ENST00000410497 104 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-516P-201ENST00000411381 104 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 VN1R51P-201ENST00000411675 945 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC244636.1-201ENST00000421152 228 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 MTATP6P11-201ENST00000428071 670 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AL035246.1-201ENST00000433554 1255 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AL161651.1-201ENST00000440882 223 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AL353718.1-201ENST00000451028 517 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RBMY2UP-201ENST00000453474 324 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 SETP20-201ENST00000457046 852 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RPL31P50-201ENST00000471002 296 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC018868.1-201ENST00000491307 315 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-703P-201ENST00000516946 107 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 RNA5SP290-201ENST00000517133 127 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC007991.1-201ENST00000522680 631 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 HIGD1AP17-201ENST00000554576 276 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC007225.2-201ENST00000562529 256 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 MIR3126-201ENST00000577443 74 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 LRRC37A5P-203ENST00000580181 585 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 MIR4271-201ENST00000582451 67 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 SEPT7P9-203ENST00000604116 343 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC104763.2-201ENST00000604179 382 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC005332.6-201ENST00000613178 446 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC243773.3-201ENST00000613270 256 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 MIR6766-201ENST00000622641 72 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC018692.3-201ENST00000623929 123 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 AC104454.1-201ENST00000421341 1401 ntBASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDC42SE1Q9NRR8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RNU5B-1-201ENST00000363286 116 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-952P-201ENST00000391164 108 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL590084.2-201ENST00000401481 382 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 BX323014.1-201ENST00000412876 237 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RPS24P7-201ENST00000416921 246 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL360221.1-201ENST00000445989 335 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL096829.2-201ENST00000446582 742 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC079776.3-201ENST00000450665 370 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC013267.1-201ENST00000458227 267 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RNU7-136P-201ENST00000458819 69 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 snoU13.8-201ENST00000458890 104 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC096576.1-201ENST00000489014 359 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC080014.1-201ENST00000496877 1201 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC083906.5-201ENST00000503722 328 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC021146.2-201ENST00000504736 556 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 SMURF2P1-201ENST00000514992 481 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RNA5SP112-201ENST00000515937 99 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-927P-201ENST00000516199 100 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms