Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC002543.1-201ENST00000299783 1954 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 RNA5SP212-201ENST00000391223 107 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 RNA5SP56-201ENST00000410277 118 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 RNU6-174P-201ENST00000410406 106 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AL451062.2-201ENST00000427515 271 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC099513.1-201ENST00000490423 301 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 MIR892C-201ENST00000516410 77 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 SNORA44.1-201ENST00000517031 108 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 DUXAP10-204ENST00000612052 616 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 AC005539.1-201ENST00000443768 1479 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 TEX21P-201ENST00000447107 1476 ntBASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
SMCO4Q9NRQ5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 MTND5P9-201ENST00000503854 1755 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 RNU4-91P-201ENST00000364778 135 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 U3.13-201ENST00000364804 214 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AL691517.1-201ENST00000440833 1235 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AL022238.1-201ENST00000442557 355 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC004223.1-201ENST00000479840 271 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC132942.1-201ENST00000486753 483 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC087276.1-201ENST00000529659 480 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 MTCYBP28-201ENST00000566728 1132 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 MIR3126-201ENST00000577443 74 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 AL669831.4-202ENST00000590817 238 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 RMST_6.1-201ENST00000611980 203 ntBASIC0.84□□□□□ -2.27
SMCO4Q9NRQ5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
SMCO4Q9NRQ5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 RNU4-82P-201ENST00000362443 140 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 SNORA40.6-201ENST00000391153 128 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AL035405.1-201ENST00000400795 710 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC234781.2-201ENST00000426370 994 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 MTND6P13-201ENST00000443510 523 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AL034418.1-201ENST00000448675 860 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC008526.1-201ENST00000509149 338 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 IGKV2D-36-201ENST00000518643 226 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC019288.1-201ENST00000557918 224 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 MIR4435-1-201ENST00000582552 80 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 BX323046.1-201ENST00000610145 535 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SMCO4Q9NRQ5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 MIR424-201ENST00000362227 98 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 RNU6-697P-201ENST00000363348 107 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 Z92545.1-201ENST00000411782 234 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AL590233.1-201ENST00000430017 456 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 RPL7P36-201ENST00000444633 681 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 MRPS33P3-201ENST00000513456 322 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 IGKV2-36-201ENST00000519999 223 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC068276.1-201ENST00000605793 379 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 AC009318.2-201ENST00000610917 651 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 MIR6845-201ENST00000613182 61 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 ZNF209P-201ENST00000593450 2304 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 TPTE2P4-201ENST00000258589 1605 ntBASIC0.82□□□□□ -2.28
SMCO4Q9NRQ5 RNU4-23P-201ENST00000362839 140 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 Y_RNA.493-201ENST00000384422 102 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 RNU6-272P-201ENST00000411028 104 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 SMC4P1-201ENST00000414479 527 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 Z85994.2-201ENST00000434327 452 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 MTCYBP29-201ENST00000436327 1006 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 MED6P1-201ENST00000439659 713 ntBASIC0.81□□□□□ -2.28
SMCO4Q9NRQ5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms