Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC092902.1-201ENST00000486999 259 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 LTV1P1-201ENST00000510683 1237 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 DEFB130C-202ENST00000530001 230 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 CYCSP39-201ENST00000565821 309 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 MIR3912-201ENST00000577566 105 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 BBIP1P1-201ENST00000602999 279 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AL450336.1-201ENST00000605180 586 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AL021997.1-201ENST00000605757 193 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC008759.3-201ENST00000613300 508 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC023158.2-201ENST00000614876 543 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC019226.1-201ENST00000625666 515 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 U6.105-201ENST00000637379 88 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 FAM133CP-201ENST00000332869 704 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RNU6-97P-201ENST00000363387 104 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RNU1-140P-201ENST00000365040 165 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RNU6-114P-201ENST00000384704 105 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AL139039.1-201ENST00000401900 692 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RPL17P12-201ENST00000413391 526 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AL158156.1-201ENST00000422509 473 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RPL35AP12-201ENST00000425362 338 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 COX7BP2-201ENST00000437976 242 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 MTND4P6-201ENST00000438297 472 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 ARPC3P5-201ENST00000448802 534 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AC072039.1-201ENST00000477611 581 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RN7SKP157-201ENST00000516174 282 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RNU2-44P-201ENST00000516795 194 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 OR6C7P-201ENST00000547875 934 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AL021368.1-201ENST00000607490 540 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 MIR7975-201ENST00000619350 68 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 AC016717.2-201ENST00000609089 5141 ntBASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
VCX3AQ9NNX9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 UBA52P6-201ENST00000399822 382 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AL359511.1-201ENST00000402970 211 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 NPM1P11-201ENST00000417106 855 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 MRPS36P1-201ENST00000421291 307 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 MICF-203ENST00000432679 129 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 FCF1P1-201ENST00000432690 571 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC010153.1-201ENST00000432862 727 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC128713.1-201ENST00000471495 306 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC068781.1-201ENST00000488231 618 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC026436.1-201ENST00000510537 270 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 RNY4P37-201ENST00000516225 96 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AL357094.1-201ENST00000603845 844 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC009314.1-201ENST00000603871 304 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC120053.1-201ENST00000607706 736 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AL356863.1-201ENST00000623378 1080 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 AC004944.1-201ENST00000517807 3059 ntBASIC2.04□□□□□ -2.08
VCX3AQ9NNX9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC110491.1-201ENST00000562191 2010 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 snoZ40.1-201ENST00000364540 72 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 RNA5SP267-201ENST00000364893 126 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 MIR183-201ENST00000384958 110 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 MTCO1P56-201ENST00000401674 224 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 RNU6-516P-201ENST00000411381 104 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms