Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC010889.1-201ENST00000566193 2666 ntBASIC1.81□□□□□ -2.12
SND1-IT1Q9HBX3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SND1-IT1Q9HBX3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RNU6-1167P-201ENST00000363227 94 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RNU6-443P-201ENST00000384780 107 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 MIR19A-201ENST00000384878 82 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 MIR183-201ENST00000384958 110 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RNU6-1176P-201ENST00000390955 107 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RNA5SP181-201ENST00000410246 98 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC010153.1-201ENST00000432862 727 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC005094.1-201ENST00000440420 368 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AL671855.1-201ENST00000446875 1203 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RPL37P6-201ENST00000460682 294 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC128713.1-201ENST00000471495 306 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC010631.1-201ENST00000474150 156 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 RPS3AP43-201ENST00000479743 781 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC090096.1-201ENST00000489168 390 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC006445.1-201ENST00000491925 405 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC134050.1-201ENST00000495088 933 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC083906.5-201ENST00000503722 328 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC117522.3-201ENST00000507974 584 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC002456.2-201ENST00000509356 380 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC091826.1-201ENST00000514065 313 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 PSMA2P1-201ENST00000526365 646 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AP002404.1-201ENST00000532005 451 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 MIR5004-201ENST00000579078 107 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC012493.2-201ENST00000595083 291 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC021171.1-201ENST00000603137 706 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC024220.1-201ENST00000603675 484 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 ELOCP35-201ENST00000604289 336 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AL161756.2-201ENST00000604597 246 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 ATP1B3P1-201ENST00000605365 821 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AL121652.1-201ENST00000608851 448 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC107294.1-201ENST00000609524 467 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC103710.1-201ENST00000610003 901 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC025594.3-201ENST00000613068 790 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC010297.1-201ENST00000623948 149 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 MIR3651-201ENST00000630427 90 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC004520.1-201ENST00000608362 1413 ntBASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
SND1-IT1Q9HBX3 AC080128.1-201ENST00000474389 1917 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC000403.1-201ENST00000613696 3585 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 SNORA4.1-201ENST00000364263 144 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RNU6-636P-201ENST00000384598 107 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 MIR620-201ENST00000385232 95 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 ANAPC10P1-201ENST00000395991 556 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RNU2-68P-201ENST00000410878 191 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RNA5SP120-201ENST00000410900 112 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 SKA2P1-201ENST00000425592 390 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC093156.1-201ENST00000440382 670 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 EXOSC3P1-201ENST00000448649 500 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RSL24D1P3-201ENST00000449255 495 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RNU7-26P-201ENST00000458980 63 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RBM43P1-201ENST00000476891 1081 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 RN7SL504P-201ENST00000494496 287 ntBASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SND1-IT1Q9HBX3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms