Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC009961.3-201ENST00000449832 765 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 RNU7-26P-201ENST00000458980 63 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC025881.1-201ENST00000518851 512 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 MIR3616-201ENST00000584070 92 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 VN1R90P-201ENST00000595717 726 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC090186.1-201ENST00000605991 572 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC135507.1-201ENST00000607214 561 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC239868.4-201ENST00000608318 671 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AC131235.4-201ENST00000609288 620 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AL138960.2-201ENST00000625145 535 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 DDX43P2-201ENST00000604753 1354 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRRC40Q9H9A6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRRC40Q9H9A6 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 RNU6-750P-201ENST00000390946 107 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL139039.1-201ENST00000401900 692 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 ARL5AP4-201ENST00000430731 512 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 NANOGP2-201ENST00000435391 727 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 PAXBP1P1-201ENST00000449315 447 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 OR5BN1P-201ENST00000532955 829 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 VN1R92P-201ENST00000598511 928 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC006270.3-201ENST00000605967 1036 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 MIR7106-201ENST00000612419 65 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC092608.2-201ENST00000624427 218 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 AC116618.1-201ENST00000634617 774 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LRRC40Q9H9A6 AL137003.2-201ENST00000606924 2538 ntBASIC2.57□□□□□ -2
LRRC40Q9H9A6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC40Q9H9A6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC40Q9H9A6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 RNU6-621P-201ENST00000364752 109 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 MIR483-201ENST00000385070 76 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 MIR34A-201ENST00000385130 110 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 CCNG1P1-201ENST00000406783 885 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 USP9YP33-201ENST00000412220 421 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC019097.1-201ENST00000424783 735 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 ATP5F1P1-201ENST00000433775 569 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 USP9YP35-201ENST00000435696 412 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC025750.2-201ENST00000442609 450 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 EEF1E1P1-201ENST00000446998 430 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC096571.1-202ENST00000506634 735 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 NDUFB4P2-201ENST00000509515 391 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC079395.1-201ENST00000510981 262 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC109445.1-201ENST00000512356 383 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 RNU6-390P-201ENST00000516259 103 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 RNA5SP290-201ENST00000517133 127 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms