Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC087373.1-201ENST00000524920 491 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AP000907.2-201ENST00000530827 353 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC013553.2-201ENST00000604244 589 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC007038.2-201ENST00000608095 740 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 OR10AB1P-201ENST00000609613 938 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC068831.7-201ENST00000616954 363 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 OR4G2P-202ENST00000641004 1759 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 SNORA51.4-201ENST00000364993 124 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AL109755.1-201ENST00000401791 649 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 TRIM60P18-201ENST00000441518 828 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 RPL36AP33-201ENST00000450395 310 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 MTND3P7-201ENST00000474435 343 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 BET1P1-201ENST00000482276 359 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 RPS3AP14-201ENST00000483907 780 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 RNU6-201P-201ENST00000517100 61 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC025881.1-201ENST00000518851 512 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 HMGN1P28-201ENST00000521340 364 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC123904.2-201ENST00000548059 300 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 MIR5697-201ENST00000578045 78 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC068790.3-201ENST00000602988 553 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC105129.3-201ENST00000605455 485 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC008962.1-201ENST00000605729 304 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC092354.1-201ENST00000606057 376 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC004908.2-201ENST00000609090 574 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC108747.1-201ENST00000609508 535 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC027807.2-201ENST00000616099 408 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.12□□□□□ -1.91
SNX25Q9H3E2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNX25Q9H3E2 CUL1P1-201ENST00000509510 2425 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 MTND5P19-201ENST00000424872 1794 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 MIR23A-201ENST00000385245 73 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 SNORD115.1-201ENST00000391109 76 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 MIR1290-201ENST00000408735 78 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL139281.1-201ENST00000422120 335 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 COTL1P1-201ENST00000422309 375 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 MTCO3P45-201ENST00000443036 613 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 BMI1P1-201ENST00000445879 941 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 RNU7-59P-201ENST00000459101 61 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AF131216.2-201ENST00000512316 564 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 RNU6-840P-201ENST00000517275 65 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 MTND4LP18-201ENST00000526864 291 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 ZNF519P3-201ENST00000557158 1032 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL356432.3-201ENST00000568952 465 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL031775.1-201ENST00000607014 887 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC009159.1-201ENST00000618386 642 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC097655.1-201ENST00000635075 318 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 AL365361.1-201ENST00000566942 3481 ntBASIC3.11□□□□□ -1.91
SNX25Q9H3E2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 RPL7P10-201ENST00000417407 739 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 USP9YP13-201ENST00000417797 480 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms