Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC012507.3-201ENST00000603556 477 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC064836.2-201ENST00000609491 462 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS16Q9H269 AL603758.1-201ENST00000618654 241 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC243312.2-201ENST00000623340 601 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC091953.2-201ENST00000623979 160 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC112200.1-201ENST00000625015 234 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 AC068724.3-201ENST00000625906 87 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS16Q9H269 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS16Q9H269 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
VPS16Q9H269 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS16Q9H269 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS16Q9H269 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS16Q9H269 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 TAB3P1-202ENST00000452645 1634 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 RNU6-173P-201ENST00000364215 104 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 Y_RNA.356-201ENST00000365475 113 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 Y_RNA.381-201ENST00000365666 102 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 MIR607-201ENST00000385241 96 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 SSXP9-201ENST00000417503 292 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS16Q9H269 MTCO1P39-201ENST00000426148 480 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 GTF2IP20-201ENST00000431663 360 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AC004866.2-201ENST00000438285 481 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC093156.1-201ENST00000440382 670 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 RPL23AP20-201ENST00000447965 421 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AC004801.2-202ENST00000463559 283 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 MTCO3P9-201ENST00000506989 781 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC026784.1-201ENST00000507986 352 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AC004062.1-201ENST00000509926 645 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC107934.1-201ENST00000522215 217 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS16Q9H269 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS16Q9H269 ARL2BPP2-201ENST00000550907 489 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC025449.1-201ENST00000603896 529 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 BNIP3P10-201ENST00000605360 577 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AC245517.5-201ENST00000611529 162 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 RMST_3.1-201ENST00000611651 109 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AL450472.3-201ENST00000615578 367 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 AL360181.4-201ENST00000621752 134 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 YWHAEP7-203ENST00000622054 312 ntBASIC3.93□□□□□ -1.78
VPS16Q9H269 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS16Q9H269 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS16Q9H269 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS16Q9H269 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS16Q9H269 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VPS16Q9H269 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS16Q9H269 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS16Q9H269 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
VPS16Q9H269 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS16Q9H269 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS16Q9H269 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS16Q9H269 RNU6-451P-201ENST00000362921 107 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 Y_RNA.86-201ENST00000363020 111 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.92□□□□□ -1.78
VPS16Q9H269 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
VPS16Q9H269 RPL23AP32-201ENST00000395315 459 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 U3.39-201ENST00000408569 239 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS16Q9H269 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS16Q9H269 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS16Q9H269 AC119618.1-201ENST00000434191 222 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 RPS29P7-201ENST00000439662 171 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AC007677.1-201ENST00000445757 515 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AL359073.1-201ENST00000448036 403 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 snoU13.4-201ENST00000458916 104 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AL133162.1-201ENST00000463228 453 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AL049830.2-201ENST00000480072 201 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 VN1R104P-201ENST00000505115 1009 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS16Q9H269 RN7SKP21-201ENST00000516503 220 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 Y_RNA.701-201ENST00000516812 110 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 RNU6-579P-201ENST00000516879 102 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 RNU6-1073P-201ENST00000517182 106 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 AC007991.1-201ENST00000522680 631 ntBASIC3.92□□□□□ -1.78
VPS16Q9H269 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS16Q9H269 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS16Q9H269 AL133153.1-201ENST00000557756 303 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms