Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC010587.1-201ENST00000505809 469 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC098799.2-201ENST00000509466 868 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 OR5AQ1P-201ENST00000527596 927 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC118273.2-201ENST00000532092 465 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 RPL21P12-201ENST00000559810 515 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL391840.1-201ENST00000571144 367 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 COX6CP3-201ENST00000580869 223 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AP001429.1-201ENST00000602568 530 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC006254.3-201ENST00000603353 884 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL391646.1-201ENST00000603860 190 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL162713.1-201ENST00000604480 262 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AC007038.2-201ENST00000608095 740 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 MIR7112-201ENST00000616126 65 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC002553.4-201ENST00000616896 331 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC006338.1-201ENST00000618453 749 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 LRRC77P-213ENST00000637727 880 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.63□□□□□ -1.83
CDT1Q9H211 MTCO1P9-201ENST00000505577 1534 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CDT1Q9H211 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDT1Q9H211 RNU1-70P-201ENST00000362618 164 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 RNU6-335P-201ENST00000364563 113 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.62□□□□□ -1.83
CDT1Q9H211 RPL23AP32-201ENST00000395315 459 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC127391.1-201ENST00000411737 98 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC063979.1-201ENST00000415539 377 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 SSXP9-201ENST00000417503 292 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 ELOCP14-201ENST00000428070 331 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 TIMM9P1-201ENST00000436122 256 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 ELOCP7-201ENST00000439968 331 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 Z75741.1-201ENST00000446793 314 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC092001.1-201ENST00000453012 261 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC234775.1-201ENST00000454247 670 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 RPL23AP62-201ENST00000463396 453 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 RPL31P58-201ENST00000469001 379 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 RBM43P1-201ENST00000476891 1081 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC114967.1-201ENST00000504890 259 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 PCBP2P3-201ENST00000509726 843 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.62□□□□□ -1.83
CDT1Q9H211 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AP004371.1-201ENST00000525240 214 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 NRBF2P1-201ENST00000587407 859 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC103710.3-201ENST00000608157 948 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.62□□□□□ -1.83
CDT1Q9H211 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AL442067.2-201ENST00000614033 363 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 AL133173.2-201ENST00000614270 90 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
CDT1Q9H211 AC073346.2-201ENST00000624724 2058 ntBASIC3.62□□□□□ -1.83
CDT1Q9H211 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDT1Q9H211 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDT1Q9H211 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDT1Q9H211 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDT1Q9H211 Y_RNA.9-201ENST00000362354 101 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 SNORA72.1-201ENST00000363485 129 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 RNU4-1-201ENST00000363925 141 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AL357075.1-201ENST00000404107 726 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 RNU4-55P-201ENST00000410731 137 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 RPS15AP12-201ENST00000419498 388 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AL353193.1-201ENST00000421444 268 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 RPL23AP82-202ENST00000427528 469 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 MTCO2P11-201ENST00000431069 680 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms