Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-694P-201ENST00000364071 147 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNU6-393P-201ENST00000384475 107 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.529-201ENST00000384586 119 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP317-201ENST00000410176 116 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP311-201ENST00000411290 116 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNU2-71P-201ENST00000411395 189 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 BX323014.1-201ENST00000412876 237 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 NDUFB4P5-201ENST00000415445 361 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 PDCL2P1-201ENST00000419302 352 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AL645937.1-202ENST00000421799 937 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AL451062.2-201ENST00000427515 271 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AL590383.1-201ENST00000428602 75 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 PPP1R2P5-201ENST00000457256 603 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC087588.1-201ENST00000462203 316 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RPL31P60-201ENST00000478450 367 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 CCDC34P1-201ENST00000507441 517 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP315-201ENST00000516340 116 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.675-201ENST00000516389 149 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 SNORA31.9-201ENST00000516429 84 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP312-201ENST00000517068 116 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RPL23AP87-202ENST00000573039 466 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RPS3AP23-202ENST00000574601 686 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC092747.3-201ENST00000603769 301 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AL591034.3-201ENST00000605511 685 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RMST_7.1-201ENST00000621935 268 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 AC022140.2-201ENST00000623500 188 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AL133412.1-201ENST00000380194 2992 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 SNORA31-201ENST00000362607 130 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 RNU6-1013P-201ENST00000384180 107 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 RNU6-434P-201ENST00000384376 107 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 RPS26P8-201ENST00000393490 348 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AL022722.2-201ENST00000402519 180 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AL122016.1-201ENST00000403365 367 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AL356432.1-201ENST00000405809 419 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 POLHP1-201ENST00000411806 470 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AL160275.3-201ENST00000423876 471 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 RPS15AP27-201ENST00000449183 343 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 FAM206BP-201ENST00000510179 541 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 RNU2-58P-201ENST00000516403 183 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 MIR15A-201ENST00000607334 83 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 Z82243.1-201ENST00000609432 473 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC107294.1-201ENST00000609524 467 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC015813.4-201ENST00000610469 179 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 MIR7151-201ENST00000617477 60 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 AC112487.2-201ENST00000637950 304 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC113Q9H0I3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 RNU6-522P-201ENST00000364497 107 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 RNU1-13P-201ENST00000384499 162 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 MIR3074-201ENST00000384885 81 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 MIR513A2-201ENST00000385249 127 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AL590704.1-201ENST00000402856 794 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms