Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP000254.1-201ENST00000609934 520 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL590099.1-201ENST00000615276 138 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC140725.3-201ENST00000616193 880 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL121895.2-201ENST00000619558 447 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC090772.4-201ENST00000623599 362 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC231657.1-201ENST00000624313 397 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC099654.8-201ENST00000637757 681 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL079343.1-201ENST00000572358 1771 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC005539.1-201ENST00000443768 1479 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 OR5H15-201ENST00000383696 930 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 SNORA80E-201ENST00000384744 137 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 RNU6-952P-201ENST00000391164 108 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AC092573.2-201ENST00000434546 243 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 NANOGP2-201ENST00000435391 727 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 MTCO1P53-201ENST00000441633 699 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 RNF2P1-201ENST00000442955 1010 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AL049714.1-201ENST00000466686 347 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 RNY4P37-201ENST00000516225 96 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 Y_RNA.676-201ENST00000516393 96 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 RANP3-201ENST00000530970 276 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 GLUD1P4-201ENST00000590914 418 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AL136981.2-201ENST00000617319 734 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 AC027309.3-201ENST00000623419 351 ntBASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP1Q9BWH6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AL022578.1-201ENST00000439330 1433 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 RNU6-560P-201ENST00000364007 108 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 Y_RNA.548-201ENST00000384656 105 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 RNU6-253P-201ENST00000384730 105 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AC107081.1-201ENST00000414975 361 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 CCDC58P2-201ENST00000417131 366 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 MTCO2P25-201ENST00000447065 681 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 ARPC3P5-201ENST00000448802 534 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AC234775.1-201ENST00000454247 670 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 RNU7-136P-201ENST00000458819 69 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 RPL23AP78-201ENST00000599928 470 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AP001429.1-201ENST00000602568 530 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AC069431.2-201ENST00000604149 1099 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AL357080.1-201ENST00000617394 239 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 MIR6766-201ENST00000622641 72 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 MTCO1P9-201ENST00000505577 1534 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 AC012321.1-201ENST00000561622 1588 ntBASIC2.75□□□□□ -1.97
RPAP1Q9BWH6 RNU6-799P-201ENST00000363567 107 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RNU6-76P-201ENST00000384060 104 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RPS15AP28-201ENST00000435088 386 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC090774.1-201ENST00000435925 246 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 SNRPGP6-201ENST00000451124 220 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC097493.1-201ENST00000463958 372 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RNU6-528P-201ENST00000516926 100 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC011451.2-201ENST00000604303 598 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AL158050.2-201ENST00000605336 568 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC006213.4-201ENST00000616184 634 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RNU6-413P-201ENST00000384115 107 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC234781.2-201ENST00000426370 994 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 BX322784.1-201ENST00000455793 1077 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 SETP11-201ENST00000473027 690 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC008716.1-201ENST00000511084 513 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms