Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 DEFB108F-201ENST00000344638 222 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RNU6-188P-201ENST00000364207 107 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RNU6-1322P-201ENST00000364309 107 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 HMGN2P8-201ENST00000391458 268 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 LAP3P1-201ENST00000403648 294 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL353193.1-201ENST00000421444 268 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 VDAC1P3-201ENST00000434069 851 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC005019.1-201ENST00000436455 431 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC115115.1-201ENST00000449927 248 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC003071.1-201ENST00000451219 789 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 HSPE1P6-201ENST00000479457 291 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RPL31P13-201ENST00000484151 370 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RN7SKP83-201ENST00000516512 178 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC011611.1-201ENST00000552179 197 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL355836.1-201ENST00000555951 870 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC092325.1-201ENST00000566449 554 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC068135.2-201ENST00000569293 1028 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AL121992.2-201ENST00000606262 256 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 PNPT1P2-201ENST00000456768 2050 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 ZNF680P1-201ENST00000436625 1469 ntBASIC3.73□□□□□ -1.81
PAAF1Q9BRP4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 XIAPP3-201ENST00000312918 795 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.381-201ENST00000365666 102 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 RNU6-701P-201ENST00000384059 107 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC068050.1-201ENST00000394891 380 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 RPS4XP8-201ENST00000402039 771 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC018630.2-202ENST00000422992 927 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 MTCO1P20-201ENST00000425366 358 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC093106.2-201ENST00000428212 385 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL121877.1-201ENST00000453704 622 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 RNU7-63P-201ENST00000459054 62 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC092451.1-201ENST00000480211 153 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL049874.1-201ENST00000489560 388 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC116562.3-201ENST00000506136 177 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC109927.2-201ENST00000506416 303 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 MYL12AP1-201ENST00000518490 515 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AP001646.1-201ENST00000527936 915 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC068587.5-201ENST00000528506 175 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC109635.3-201ENST00000529536 185 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AK6P1-201ENST00000540219 478 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AL157687.1-201ENST00000554853 619 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 SNORA59B-202ENST00000578183 701 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC007621.1-201ENST00000604544 437 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC005609.4-201ENST00000625071 447 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 MIR3688-2-201ENST00000636963 87 ntBASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PAAF1Q9BRP4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms