Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF2Q99805 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF2Q99805 AL672167.1-203ENST00000641299 2975 ntBASIC4.51□□□□□ -1.69
TM9SF2Q99805 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TM9SF2Q99805 AC068254.2-201ENST00000623938 3577 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 EOGT-210ENST00000615922 1931 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNU6-1309P-201ENST00000363305 108 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 Y_RNA.252-201ENST00000364556 101 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 Y_RNA.364-201ENST00000365532 101 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 SNORA2.3-201ENST00000383920 135 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 MRPL42P3-201ENST00000401492 326 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 UBE2D3P2-201ENST00000424409 445 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 USP9YP7-201ENST00000436723 430 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RPL34P20-201ENST00000442771 351 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RPL21P23-201ENST00000446654 460 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 USP9YP32-201ENST00000452432 430 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 PCMTD1P1-201ENST00000455560 355 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 DHFRP3-201ENST00000455595 559 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AL445433.1-201ENST00000457507 257 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 HMGB3P30-201ENST00000457863 606 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC092324.1-201ENST00000468671 324 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC022493.2-201ENST00000506122 481 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 SNORA25.10-201ENST00000515926 124 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNU1-86P-201ENST00000516108 154 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 SNORA31.8-201ENST00000516327 108 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 MIR892C-201ENST00000516410 77 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNA5SP43-201ENST00000516559 110 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNU1-107P-201ENST00000516617 154 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNU6-699P-201ENST00000517081 110 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AP003122.3-201ENST00000526316 255 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC084851.1-201ENST00000529105 249 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 AL352979.3-201ENST00000553515 247 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 TRAV37-201ENST00000553906 342 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 NDUFB4P11-201ENST00000560510 395 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC010653.1-201ENST00000571108 881 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 CYCSP40-201ENST00000575927 294 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 MIR4680-201ENST00000580906 66 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.5□□□□□ -1.69
TM9SF2Q99805 RNF138P2-201ENST00000603490 592 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 uc_338.18-201ENST00000615451 175 ntBASIC4.5□□□□□ -1.69
TM9SF2Q99805 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF2Q99805 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AL445487.1-201ENST00000415694 1580 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 NCAPGP1-201ENST00000505112 1814 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF2Q99805 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF2Q99805 RNU6-490P-201ENST00000362985 107 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 Y_RNA.158-201ENST00000363651 101 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 RNU6-1032P-201ENST00000384100 107 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 RNU6-790P-201ENST00000384479 105 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 RNU6-1105P-201ENST00000384774 107 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AL160275.2-201ENST00000412010 394 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 Z85995.1-201ENST00000415547 335 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 OR2AM1P-201ENST00000422137 422 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 RSL24D1P6-201ENST00000426934 401 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 NOTCH2P1-201ENST00000443481 624 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC112498.1-201ENST00000444401 332 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 VWA8P1-201ENST00000510889 176 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 Vault.1-201ENST00000516474 102 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 RNU6-264P-201ENST00000517134 104 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 AC005255.1-201ENST00000593748 216 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AL160281.1-201ENST00000605307 311 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 AP005432.2-201ENST00000608162 586 ntBASIC4.49□□□□□ -1.69
TM9SF2Q99805 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
TM9SF2Q99805 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms