Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HMGB1P5-201ENST00000255320 642 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 MIR1250-201ENST00000408098 113 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AL445183.3-201ENST00000414168 502 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA3Q99758 AC234781.2-201ENST00000426370 994 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA3Q99758 IFNA20P-201ENST00000436840 528 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AC005297.2-201ENST00000450430 606 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA3Q99758 snoU13.3-201ENST00000459441 104 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AP003033.1-201ENST00000527244 415 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AC084364.2-201ENST00000546924 395 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA3Q99758 RN7SL793P-201ENST00000583259 296 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AC245036.5-201ENST00000596330 847 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA3Q99758 AL031601.2-202ENST00000622650 282 ntBASIC1.73□□□□□ -2.13
ABCA3Q99758 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA3Q99758 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.72□□□□□ -2.13
ABCA3Q99758 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA3Q99758 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA3Q99758 RPS3AP22-201ENST00000488297 769 ntBASIC1.72□□□□□ -2.13
ABCA3Q99758 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA3Q99758 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA3Q99758 AL449363.1-201ENST00000617815 186 ntBASIC1.72□□□□□ -2.13
ABCA3Q99758 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA3Q99758 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
ABCA3Q99758 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.72□□□□□ -2.13
ABCA3Q99758 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.72□□□□□ -2.13
ABCA3Q99758 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.13
ABCA3Q99758 SNORD23.1-201ENST00000408212 104 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 SNRPFP3-201ENST00000457792 225 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 MIR514B-201ENST00000516774 80 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 RNA5SP471-201ENST00000516971 106 ntBASIC1.71□□□□□ -2.13
ABCA3Q99758 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.71□□□□□ -2.13
ABCA3Q99758 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA3Q99758 RNU1-133P-201ENST00000364867 167 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA3Q99758 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.71□□□□□ -2.14
ABCA3Q99758 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 AC092902.1-201ENST00000486999 259 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA3Q99758 AC025768.1-201ENST00000510057 267 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA3Q99758 RNA5SP61-201ENST00000516453 100 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 AP004371.1-201ENST00000525240 214 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA3Q99758 MIR6864-201ENST00000617935 70 ntBASIC1.71□□□□□ -2.14
ABCA3Q99758 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA3Q99758 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA3Q99758 RNU6-1072P-201ENST00000384703 107 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 RNU6-443P-201ENST00000384780 107 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA3Q99758 AL445669.1-201ENST00000426743 755 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 MTCYBP12-201ENST00000440559 1134 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 AP005435.4-201ENST00000529514 284 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 AL121821.2-201ENST00000556081 394 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 ANP32BP3-201ENST00000559213 706 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 CBX3P2-202ENST00000583365 535 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 AC008133.2-201ENST00000624540 351 ntBASIC1.7□□□□□ -2.14
ABCA3Q99758 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ABCA3Q99758 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA3Q99758 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA3Q99758 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA3Q99758 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA3Q99758 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 Y_RNA.393-201ENST00000383936 102 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 MIR222-201ENST00000384992 110 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL030996.1-201ENST00000411430 235 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL022400.1-201ENST00000423946 935 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA3Q99758 AC007560.1-201ENST00000426912 237 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL135752.1-201ENST00000479477 471 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.69□□□□□ -2.14
ABCA3Q99758 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA3Q99758 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA3Q99758 DUXAP5-201ENST00000529668 529 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL161629.2-201ENST00000615347 275 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA3Q99758 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA3Q99758 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA3Q99758 AL590233.1-201ENST00000430017 456 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL445687.1-201ENST00000439946 251 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.69□□□□□ -2.14
ABCA3Q99758 SNORA31.8-201ENST00000516327 108 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 RN7SKP265-201ENST00000516448 223 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 RNU6-405P-201ENST00000516637 110 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 RNU6-467P-201ENST00000517027 110 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 BTF3P12-201ENST00000519620 469 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA3Q99758 MTCO1P40-201ENST00000574371 625 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 COX6CP3-201ENST00000580869 223 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA3Q99758 AP005137.2-201ENST00000609238 400 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AL162373.1-201ENST00000620433 407 ntBASIC1.69□□□□□ -2.14
ABCA3Q99758 AC005534.2-201ENST00000431047 433 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms