Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTCO3P2-201ENST00000457365 171 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU7-180P-201ENST00000459240 63 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC104563.1-201ENST00000476147 376 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AL132838.2-201ENST00000492041 314 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC104564.1-201ENST00000493028 407 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC110794.1-201ENST00000505816 425 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP454-201ENST00000517231 127 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 BNIP3P16-201ENST00000589779 534 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 SPRR2C-201ENST00000290702 219 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.364-201ENST00000365532 101 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 SNORA51.6-201ENST00000384151 125 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-1013P-201ENST00000384180 107 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 SNORD3H-201ENST00000384486 214 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR454-201ENST00000390180 115 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU11-4P-201ENST00000391149 133 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RPS24P13-201ENST00000442520 397 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 PCNPP5-201ENST00000452246 481 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 PABPC1P3-201ENST00000469174 459 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL23AP2-201ENST00000471227 466 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RPS27P27-201ENST00000498779 255 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC026801.2-201ENST00000515352 425 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.661-201ENST00000516003 99 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-120P-201ENST00000516077 103 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC009902.1-201ENST00000519351 183 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC069240.1-201ENST00000548774 375 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 BNIP3P5-201ENST00000562290 498 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC105224.1-201ENST00000587055 421 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 NF1P5-201ENST00000588287 448 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC104662.1-201ENST00000604448 511 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 Z82243.1-201ENST00000609432 473 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC006157.1-201ENST00000611750 366 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC012409.4-201ENST00000612923 249 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AL390240.1-201ENST00000612950 384 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR7151-201ENST00000617477 60 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AC092608.2-201ENST00000624427 218 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 AL669831.3-213ENST00000636676 183 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 Z82217.1-201ENST00000625157 8149 ntBASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP1Q96SZ6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC016588.2-201ENST00000632484 3021 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-1040P-201ENST00000383974 107 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-1207P-201ENST00000384343 107 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RNY1P14-201ENST00000384426 108 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.496-201ENST00000384444 101 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU4-70P-201ENST00000384579 139 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 PPIAP31-201ENST00000405422 495 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR548I3-201ENST00000408378 149 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR548I1-201ENST00000408810 149 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC080125.1-201ENST00000414888 684 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 RAC1P6-201ENST00000423911 575 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 TIMM9P1-201ENST00000436122 256 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 FTH1P1-201ENST00000437933 532 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC006011.1-201ENST00000442758 349 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms