Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-467P-201ENST00000517027 110 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC012213.4-201ENST00000606457 354 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC009090.3-201ENST00000616553 565 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AL445493.3-201ENST00000619568 477 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
IFT140Q96RY7 SNORA51.12-201ENST00000384448 134 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 MIR758-201ENST00000390227 88 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC096533.1-201ENST00000411645 353 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 MTND2P8-201ENST00000450555 1025 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 RN7SKP277-201ENST00000516895 283 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 SUB1P4-201ENST00000566062 339 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC009220.3-201ENST00000604318 586 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 AC245884.12-201ENST00000615364 59 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 RMST_5.1-201ENST00000618704 126 ntBASIC1.95□□□□□ -2.1
IFT140Q96RY7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.95□□□□□ -2.1
IFT140Q96RY7 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 RNU1-148P-201ENST00000384472 162 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 MTATP6P4-201ENST00000427725 675 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC005534.2-201ENST00000431047 433 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AL445305.1-201ENST00000432577 575 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 MTCYBP29-201ENST00000436327 1006 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AL136380.1-201ENST00000447970 162 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 NDUFS5P6-201ENST00000529136 295 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC008133.2-201ENST00000624540 351 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
IFT140Q96RY7 RNU6-317P-201ENST00000384031 107 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 HNRNPDP2-201ENST00000406475 478 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.94□□□□□ -2.1
IFT140Q96RY7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
IFT140Q96RY7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.94□□□□□ -2.1
IFT140Q96RY7 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 SNRPEP4-201ENST00000435815 279 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.94□□□□□ -2.1
IFT140Q96RY7 SNORA31.23-201ENST00000517219 133 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC118942.1-201ENST00000529674 1035 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC109635.4-202ENST00000531666 412 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 OSBPL9P3-201ENST00000534523 595 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC023825.1-201ENST00000566704 1030 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 AC211469.2-201ENST00000605461 205 ntBASIC1.94□□□□□ -2.1
IFT140Q96RY7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
IFT140Q96RY7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.93□□□□□ -2.1
IFT140Q96RY7 RNU4-65P-201ENST00000410473 140 ntBASIC1.93□□□□□ -2.1
IFT140Q96RY7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 SDCBPP1-201ENST00000440192 890 ntBASIC1.93□□□□□ -2.1
IFT140Q96RY7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 SNORA31.16-201ENST00000516773 139 ntBASIC1.93□□□□□ -2.1
IFT140Q96RY7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.93□□□□□ -2.1
IFT140Q96RY7 PCNAP1-202ENST00000595299 752 ntBASIC1.93□□□□□ -2.1
IFT140Q96RY7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 RNU6-1181P-201ENST00000384191 106 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 RNY1P4-201ENST00000384595 115 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 AL591212.2-201ENST00000433923 257 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 IFNA20P-201ENST00000436840 528 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
IFT140Q96RY7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 AC093852.1-201ENST00000503587 266 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 RNA5SP468-201ENST00000516782 93 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
IFT140Q96RY7 AC008962.1-201ENST00000605729 304 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 AL590282.1-201ENST00000610379 1136 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 AL133370.2-201ENST00000619934 439 ntBASIC1.92□□□□□ -2.1
IFT140Q96RY7 RPS15AP40-201ENST00000419621 391 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 AC233728.2-201ENST00000425348 757 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 OR51AB1P-201ENST00000429046 620 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 PSPHP1-201ENST00000450062 261 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 ATG12P2-201ENST00000456830 416 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 BZW1P2-201ENST00000473537 826 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 AC087879.1-201ENST00000474343 374 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.91□□□□□ -2.1
IFT140Q96RY7 HMGB3P17-201ENST00000504195 649 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.91□□□□□ -2.1
IFT140Q96RY7 CR383656.8-201ENST00000549046 145 ntBASIC1.91□□□□□ -2.1
IFT140Q96RY7 AC021755.4-201ENST00000616620 456 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms