Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 RNU6-333P-201ENST00000459117 107 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC103851.1-201ENST00000506833 274 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC008958.1-201ENST00000511047 682 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 RNA5SP49-201ENST00000516450 115 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 MIR2116-201ENST00000517221 80 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AP004371.1-201ENST00000525240 214 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC087241.2-201ENST00000535801 324 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 NCAPGP2-201ENST00000557911 754 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC044792.1-201ENST00000593294 196 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC135507.2-201ENST00000612443 309 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX18Q96RF0 ZYXP1-201ENST00000617638 118 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AL445567.2-201ENST00000618935 498 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 RMST_7.1-201ENST00000621935 268 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AL353748.2-201ENST00000622148 471 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC011155.2-201ENST00000623202 216 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX18Q96RF0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SNX18Q96RF0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SNX18Q96RF0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX18Q96RF0 AC116667.1-201ENST00000604855 2072 ntBASIC3.71□□□□□ -1.82
SNX18Q96RF0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL365440.1-201ENST00000436135 2167 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 MIR383-201ENST00000362257 73 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU6-61P-201ENST00000365528 109 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU6-510P-201ENST00000391239 108 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL359634.1-202ENST00000404721 284 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 TXNP7-201ENST00000406296 293 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU4-26P-201ENST00000410270 107 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 BX323014.1-201ENST00000412876 237 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 IFNA20P-201ENST00000436840 528 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 CYCSP43-201ENST00000438233 310 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL359073.1-201ENST00000448036 403 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL590639.1-201ENST00000456484 337 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC007547.1-201ENST00000462177 490 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RPL7P19-201ENST00000469948 618 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 RN7SL432P-201ENST00000484057 298 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RPL7P47-201ENST00000497299 556 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 TTC39CP1-201ENST00000512513 755 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU4-49P-201ENST00000516080 140 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNA5SP519-201ENST00000516480 119 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNA5SP309-201ENST00000516670 106 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC008489.1-201ENST00000524271 483 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC093012.1-202ENST00000549403 582 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 SCOCP1-201ENST00000554676 349 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 ANP32BP3-201ENST00000559213 706 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 MIR5047-201ENST00000579212 100 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.6-201ENST00000603753 252 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.11-201ENST00000604059 253 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC008162.1-201ENST00000604718 254 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.1-201ENST00000604752 252 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.5-201ENST00000605253 252 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.12-201ENST00000605291 253 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.8-201ENST00000605353 252 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL670379.7-201ENST00000605823 252 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AC015967.1-201ENST00000619893 476 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 AL589994.2-201ENST00000621124 579 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 MIR4275-201ENST00000636486 87 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 TPTEP1-208ENST00000636884 213 ntBASIC3.7□□□□□ -1.82
SNX18Q96RF0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SNX18Q96RF0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX18Q96RF0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX18Q96RF0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms