Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RNU6-370P-201ENST00000411008 104 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 TOMM22P1-201ENST00000418578 312 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RPL23AP38-201ENST00000423801 469 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MTATP6P16-201ENST00000434543 526 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 CYCSP43-201ENST00000438233 310 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 HMGB3P11-201ENST00000440127 604 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 PRPS1P1-201ENST00000445305 876 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC104073.1-201ENST00000451988 151 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC104308.1-201ENST00000454621 333 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC021382.1-201ENST00000483523 359 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 OR4P1P-201ENST00000530808 1136 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC100770.1-201ENST00000532310 322 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 OR5B10P-201ENST00000532869 642 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC107016.1-201ENST00000550463 337 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 SETP2-201ENST00000553886 926 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL118558.2-201ENST00000556294 238 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MIR4775-201ENST00000581168 75 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC010201.1-201ENST00000605051 540 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL596245.1-201ENST00000618994 362 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC140479.6-201ENST00000633535 357 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MIR492-201ENST00000638676 116 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC139769.1-204ENST00000472297 1931 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 HSPE1P11-201ENST00000339579 310 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RNA5SP307-201ENST00000362863 116 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SNORA62.1-201ENST00000364287 154 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SNORA7.2-201ENST00000364446 145 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MIR607-201ENST00000385241 96 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MIR3065-201ENST00000390137 79 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RN7SKP158-201ENST00000410453 326 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 BX323014.1-201ENST00000412876 237 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MED13P1-201ENST00000428342 171 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SNRPEP4-201ENST00000435815 279 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AL137792.2-201ENST00000443484 235 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RPL7P52-201ENST00000449200 742 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC107399.1-201ENST00000451226 265 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RNU7-182P-201ENST00000459009 62 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RNU7-180P-201ENST00000459240 63 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AP001992.1-205ENST00000462248 379 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC126389.1-201ENST00000477436 290 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC020893.1-201ENST00000502452 580 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC093853.1-201ENST00000515689 483 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AP003385.6-201ENST00000531603 374 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC090615.1-201ENST00000577519 154 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 MIR4503-201ENST00000582187 83 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 7SK.7-201ENST00000603504 247 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC079587.1-201ENST00000603846 277 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC245517.5-201ENST00000611529 162 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC007792.1-201ENST00000623023 402 ntBASIC3.54□□□□□ -1.84
ZNF48Q96MX3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms