Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 RNU6-512P-201ENST00000364438 103 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 RNU6-61P-201ENST00000365528 109 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 RNU4-48P-201ENST00000365559 182 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 Y_RNA.505-201ENST00000384489 102 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 RNU6-387P-201ENST00000411331 105 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC007390.1-201ENST00000415722 356 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AL109913.1-201ENST00000421173 514 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 OR2B8P-201ENST00000432841 938 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AL591212.2-201ENST00000433923 257 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 RPS15AP9-201ENST00000439856 381 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 RPL23AP20-201ENST00000447965 421 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 MRPS17P3-201ENST00000465453 385 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 Y_RNA.689-201ENST00000516589 107 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC016957.1-201ENST00000534895 309 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 MIR3160-1-201ENST00000577972 85 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 BNIP3P9-201ENST00000603714 553 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC136601.2-201ENST00000604356 474 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC008536.2-201ENST00000607284 349 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 PLCE1P1-201ENST00000622094 305 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC138Q96M89 AC007656.2-201ENST00000624902 4547 ntBASIC3.81□□□□□ -1.8
CCDC138Q96M89 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 API5P2-201ENST00000397055 1498 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 RNA5SP97-201ENST00000365006 84 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 RNU6-606P-201ENST00000384721 111 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 MIR23B-201ENST00000384832 97 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 MIR1193-201ENST00000408109 78 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 RNU2-9P-201ENST00000410194 145 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AF274854.1-201ENST00000413236 615 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 OR51A5P-201ENST00000415429 942 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AL451062.2-201ENST00000427515 271 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 ELOCP14-201ENST00000428070 331 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 ELOCP7-201ENST00000439968 331 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 ATP5C1P1-201ENST00000441945 895 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 DDX3P2-201ENST00000446138 111 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC026402.1-201ENST00000513642 170 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 RNU6-143P-201ENST00000516942 93 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 AP001893.2-201ENST00000526949 202 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC011602.1-201ENST00000546484 331 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 ADI1P3-201ENST00000549509 470 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AMZ2P1-203ENST00000565833 850 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC010591.1-201ENST00000603941 649 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC022893.3-201ENST00000607665 437 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AC130324.3-201ENST00000614165 542 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AL359547.2-201ENST00000615810 418 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 MIR6875-201ENST00000617506 72 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AL359880.1-201ENST00000621879 266 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 MIR6500-201ENST00000622700 86 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 SEPT14P19-203ENST00000633205 211 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 U6.114-201ENST00000636407 96 ntBASIC3.8□□□□□ -1.8
CCDC138Q96M89 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms