Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX27Q96L92 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SNX27Q96L92 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX27Q96L92 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX27Q96L92 RNU6-600P-201ENST00000362524 99 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 RNA5SP50-201ENST00000363731 107 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 U3.11-201ENST00000364476 212 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 RNA5SP189-201ENST00000364920 115 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 RNU6-76P-201ENST00000384060 104 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 MIR607-201ENST00000385241 96 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 UBE2V1P10-201ENST00000414685 269 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX27Q96L92 MTATP6P4-201ENST00000427725 675 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 C8orf59P1-201ENST00000429930 303 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX27Q96L92 MTCO2P11-201ENST00000431069 680 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AC132479.1-201ENST00000449160 144 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 RN7SL330P-201ENST00000469709 307 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AC007182.2-201ENST00000489251 402 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AC069499.1-201ENST00000489433 509 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 RPL23AP55-201ENST00000498163 452 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX27Q96L92 RNU6-314P-201ENST00000516574 104 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 MTND1P5-201ENST00000517906 940 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 FAM92A1P1-201ENST00000528023 890 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 MIR4293-201ENST00000584305 78 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX27Q96L92 AF038458.1-201ENST00000588406 262 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AP001330.4-201ENST00000604350 154 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AF250324.2-201ENST00000608299 610 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 AC007684.1-201ENST00000609671 477 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SNX27Q96L92 MIR6863-201ENST00000636112 90 ntBASIC3.98□□□□□ -1.77
SNX27Q96L92 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX27Q96L92 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX27Q96L92 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX27Q96L92 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 SNORD56.2-201ENST00000363242 71 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 RNU4-55P-201ENST00000410731 137 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX27Q96L92 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC005326.1-201ENST00000429197 123 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC073464.1-201ENST00000429823 534 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 RPL26P6-201ENST00000440913 438 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AL662791.1-201ENST00000441992 928 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC016696.1-201ENST00000446949 318 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 RPL23AP31-201ENST00000456160 467 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 RPL23AP62-201ENST00000463396 453 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC023194.1-201ENST00000493084 308 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 HMGB1P29-201ENST00000505659 499 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX27Q96L92 RNU2-10P-201ENST00000516375 211 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 SNORA31.22-201ENST00000517204 135 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 RANP9-201ENST00000519957 271 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 FAM60DP-201ENST00000524174 632 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC128657.1-201ENST00000549459 145 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX27Q96L92 MIR4425-201ENST00000580572 84 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 MIR4435-1-201ENST00000582552 80 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC107304.1-201ENST00000604229 296 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX27Q96L92 MIR4275-201ENST00000636486 87 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC080128.1-201ENST00000474389 1917 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 MFSD8-236ENST00000641509 4050 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SNX27Q96L92 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 AC007823.1-201ENST00000569932 1566 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 AC092326.2-201ENST00000624772 1561 ntBASIC3.97□□□□□ -1.77
SNX27Q96L92 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SNX27Q96L92 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX27Q96L92 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SNX27Q96L92 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
SNX27Q96L92 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.96□□□□□ -1.77
SNX27Q96L92 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX27Q96L92 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX27Q96L92 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
SNX27Q96L92 SNORA51.2-201ENST00000364595 132 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms