Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC236972.2-201ENST00000434979 310 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC116533.1-201ENST00000459748 321 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 RPL23AP2-201ENST00000471227 466 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC105137.1-201ENST00000484355 562 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC083904.1-201ENST00000487828 231 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 RPL7P23-201ENST00000493874 747 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AL121821.2-201ENST00000556081 394 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC104662.1-201ENST00000604448 511 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC069200.1-201ENST00000609511 323 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 FAM27D1-201ENST00000612308 341 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 AC004696.1-201ENST00000614345 607 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 RMST_9.1-201ENST00000619945 193 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.67□□□□□ -1.66
CHAMP1Q96JM3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AL450326.2-201ENST00000421913 1962 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 SNORA63.1-201ENST00000362493 131 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 SNORA71.3-201ENST00000362582 128 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 SNORD116-29-201ENST00000384516 83 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RNU1-89P-201ENST00000384592 164 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 MIR7-3-201ENST00000384898 110 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RNU4-14P-201ENST00000410858 122 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RPL7P46-201ENST00000425129 740 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 COX6B1P7-201ENST00000430845 235 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AL356535.1-201ENST00000440335 398 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RPL23AP33-201ENST00000442301 452 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RPS27AP1-201ENST00000475545 471 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 MTCO1P29-201ENST00000496868 288 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RNU6-1088P-201ENST00000516850 104 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 MTND4P7-201ENST00000523876 130 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AP005639.2-201ENST00000527592 928 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AP003385.6-201ENST00000531603 374 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AL137161.1-201ENST00000532231 390 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC022968.1-201ENST00000567372 442 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC012669.1-201ENST00000603209 283 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AC006254.3-201ENST00000603353 884 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AL031176.1-201ENST00000604554 466 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AP001836.1-201ENST00000604675 523 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 uc_338.15-201ENST00000615470 191 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 AL357559.1-201ENST00000622228 274 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 API5P2-201ENST00000397055 1498 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHAMP1Q96JM3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHAMP1Q96JM3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.65□□□□□ -1.66
CHAMP1Q96JM3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHAMP1Q96JM3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHAMP1Q96JM3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.65□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.259-201ENST00000364619 101 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 Y_RNA.315-201ENST00000365117 102 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 SMIM11P1-201ENST00000369586 178 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 RNU6-43P-201ENST00000384302 107 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 SNORA70E-201ENST00000384492 135 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 MIR135A2-201ENST00000384854 100 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 Y_RNA.579-201ENST00000390939 94 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 RPL21P24-201ENST00000413752 448 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 UBE2FP1-201ENST00000416536 447 ntBASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.65□□□□□ -1.67
CHAMP1Q96JM3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms