Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 AC092106.3-201ENST00000611308 722 ntBASIC3.04□□□□□ -1.92
VMP1Q96GC9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VMP1Q96GC9 MIR7112-201ENST00000616126 65 ntBASIC3.04□□□□□ -1.92
VMP1Q96GC9 AL607023.1-201ENST00000620045 248 ntBASIC3.04□□□□□ -1.92
VMP1Q96GC9 AL136313.1-201ENST00000624804 202 ntBASIC3.04□□□□□ -1.92
VMP1Q96GC9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VMP1Q96GC9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VMP1Q96GC9 RNU1-70P-201ENST00000362618 164 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 RNU4-47P-201ENST00000410876 114 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 RNU2-68P-201ENST00000410878 191 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC063979.1-201ENST00000415539 377 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC096649.2-201ENST00000416186 393 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL096701.2-201ENST00000416920 238 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 LARP1BP3-201ENST00000437229 869 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 NANOGNBP1-201ENST00000448444 480 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC107626.1-201ENST00000471084 183 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC109925.1-201ENST00000478069 331 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VMP1Q96GC9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 MRPS36P5-201ENST00000551909 298 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 RPL12P50-201ENST00000603116 116 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AP000403.1-201ENST00000603349 851 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC098826.3-201ENST00000603823 466 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL161798.1-201ENST00000604630 131 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC069234.5-201ENST00000611056 416 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 AL359693.1-201ENST00000614959 2407 ntBASIC3.03□□□□□ -1.92
VMP1Q96GC9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VMP1Q96GC9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 RNU6-1284P-201ENST00000363701 100 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 RNU5A-8P-201ENST00000364102 114 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 RNU1-73P-201ENST00000383971 164 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 TAS2R15P-201ENST00000390674 928 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL008987.1-201ENST00000415528 237 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL022400.1-201ENST00000423946 935 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VMP1Q96GC9 HMGB1P27-201ENST00000431429 603 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 GPM6BP2-201ENST00000432046 144 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 FCF1P1-201ENST00000432690 571 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 CST9LP2-201ENST00000437612 320 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC098831.1-201ENST00000440661 216 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 OSTCP8-201ENST00000445117 448 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 GPM6BP1-201ENST00000446387 144 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 Z75741.1-201ENST00000446793 314 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 Z99127.3-201ENST00000448158 395 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 SNORA70.24-201ENST00000517233 118 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 MTATP6P15-201ENST00000527233 835 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 MIR4293-201ENST00000584305 78 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 BNIP3P40-201ENST00000596017 556 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC245884.10-201ENST00000597355 337 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC105148.1-201ENST00000604961 409 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC079416.3-201ENST00000624479 549 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 MIR3651-201ENST00000630427 90 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 U2.21-201ENST00000637295 81 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 277.7 ms