Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AL160314.1-201ENST00000490836 438 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC138853.1-201ENST00000503549 823 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC116347.2-201ENST00000514912 523 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 RN7SKP258-201ENST00000517151 304 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC090616.2-202ENST00000584248 222 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 MTCYBP22-201ENST00000603788 447 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AL136363.1-201ENST00000605349 337 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AC063944.3-201ENST00000609969 533 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 FTX_3.1-201ENST00000610451 147 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AL356266.1-201ENST00000623311 483 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 AL136313.1-201ENST00000624804 202 ntBASIC3.16□□□□□ -1.9
SIPA1Q96FS4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SIPA1Q96FS4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.9
SIPA1Q96FS4 AC000403.1-201ENST00000613696 3585 ntBASIC3.15□□□□□ -1.9
SIPA1Q96FS4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.15□□□□□ -1.9
SIPA1Q96FS4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SIPA1Q96FS4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.15□□□□□ -1.9
SIPA1Q96FS4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 RNU6-140P-201ENST00000384566 108 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AL353777.1-201ENST00000425552 326 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC087588.1-201ENST00000462203 316 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC068587.2-201ENST00000478386 781 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 MTND1P22-201ENST00000510572 951 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 RN7SKP272-201ENST00000516988 232 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 KC877982.1-201ENST00000602313 470 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 U73023.1-201ENST00000603134 700 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AL353778.1-201ENST00000603149 408 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC090970.3-201ENST00000612566 866 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC100793.4-201ENST00000613683 429 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC004852.3-201ENST00000614131 326 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC140725.3-201ENST00000616193 880 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC009159.1-201ENST00000618386 642 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
SIPA1Q96FS4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SIPA1Q96FS4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 MTND4P20-201ENST00000424125 869 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AL365184.2-201ENST00000431139 435 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AL512286.1-201ENST00000439244 400 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 HMGB3P11-201ENST00000440127 604 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 DDX3P2-201ENST00000446138 111 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 MTND4LP3-201ENST00000468320 276 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 RPL30P6-201ENST00000475925 342 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
SIPA1Q96FS4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SIPA1Q96FS4 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms