Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 RNU4-35P-201ENST00000362588 141 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RNU6-511P-201ENST00000363496 107 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 Z85995.1-201ENST00000415547 335 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AL589872.1-201ENST00000426602 288 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC119618.1-201ENST00000434191 222 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 KATNBL1P3-201ENST00000443475 909 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 MTATP6P30-201ENST00000443540 664 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 USP9YP29-201ENST00000445112 563 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AL360221.1-201ENST00000445989 335 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AP000936.2-201ENST00000447151 681 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RPL30P14-201ENST00000482744 348 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC010587.1-201ENST00000505809 469 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC010424.1-201ENST00000506336 297 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RNA5SP337-201ENST00000517007 109 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RNU2-46P-201ENST00000517038 113 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 RN7SKP258-201ENST00000517151 304 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC011979.2-201ENST00000527568 352 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 MIR3682-201ENST00000581338 84 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 SEPT7P9-203ENST00000604116 343 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 AC009090.3-201ENST00000616553 565 ntBASIC3.12□□□□□ -1.91
SPDL1Q96EA4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPDL1Q96EA4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC007785.2-201ENST00000598627 1916 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC009487.2-201ENST00000420969 6821 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RNU5E-1-201ENST00000362477 120 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RNU6-297P-201ENST00000384636 107 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 Y_RNA.553-201ENST00000384670 102 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RPL23AP32-201ENST00000395315 459 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RNU6-248P-201ENST00000410720 107 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL122001.1-201ENST00000457027 370 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 SNORD97-201ENST00000459187 142 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RBM43P1-201ENST00000476891 1081 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RPS27AP9-201ENST00000477681 438 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RAP1BP2-201ENST00000478270 544 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC128657.1-201ENST00000549459 145 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC136624.4-201ENST00000573044 370 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 DUXAP4-201ENST00000603046 613 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC067959.1-201ENST00000604334 379 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 AC080013.6-201ENST00000606185 215 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 MIR6748-201ENST00000610433 71 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 OR5H6-203ENST00000642105 978 ntBASIC3.11□□□□□ -1.91
SPDL1Q96EA4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SPDL1Q96EA4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
SPDL1Q96EA4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPDL1Q96EA4 U8.3-201ENST00000363321 132 ntBASIC3.1□□□□□ -1.91
SPDL1Q96EA4 AL359837.1-201ENST00000381357 287 ntBASIC3.1□□□□□ -1.91
SPDL1Q96EA4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.1□□□□□ -1.91
SPDL1Q96EA4 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
SPDL1Q96EA4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.1□□□□□ -1.91
SPDL1Q96EA4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.1□□□□□ -1.91
SPDL1Q96EA4 AL365338.1-201ENST00000422282 858 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms