Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC064836.2-201ENST00000609491 462 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 MIR6716-201ENST00000613413 80 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AL391261.4-201ENST00000616012 481 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AL591424.2-201ENST00000617023 128 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC090574.1-201ENST00000623186 233 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.48□□□□□ -1.69
ERCC4Q92889 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC4Q92889 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC4Q92889 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
ERCC4Q92889 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC4Q92889 AL645937.1-201ENST00000641739 1652 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC4Q92889 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC244517.1-201ENST00000606030 2086 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 RNU6-179P-201ENST00000363350 107 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 Y_RNA.184-201ENST00000363884 108 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 SNORD115-7-201ENST00000365306 82 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 SNORA24.1-201ENST00000384401 135 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 MIR135A2-201ENST00000384854 100 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 RPL7L1P10-201ENST00000427790 463 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.47□□□□□ -1.69
ERCC4Q92889 KCTD9P3-201ENST00000434597 1169 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AL162389.1-201ENST00000449233 177 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC233279.1-201ENST00000455300 423 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 RPL21P99-201ENST00000480369 423 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 RN7SL604P-201ENST00000492589 296 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC098591.2-201ENST00000510152 315 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC108043.1-201ENST00000512696 574 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 RNA5SP503-201ENST00000517047 117 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 IGKV2-23-201ENST00000518729 323 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 CYCSP29-201ENST00000533731 318 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.47□□□□□ -1.69
ERCC4Q92889 AL590392.1-201ENST00000604960 446 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 MIR6868-201ENST00000611215 58 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 TUG1_2.1-201ENST00000614234 87 ntBASIC4.47□□□□□ -1.69
ERCC4Q92889 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC4Q92889 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC4Q92889 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
ERCC4Q92889 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ERCC4Q92889 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ERCC4Q92889 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC4Q92889 Y_RNA.167-201ENST00000363735 109 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RNU6-188P-201ENST00000364207 107 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 SNORA32.2-201ENST00000384049 122 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RNU6-831P-201ENST00000384548 107 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 SNORD37.1-201ENST00000390968 65 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RNU4-26P-201ENST00000410270 107 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RN7SKP159-201ENST00000410657 292 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RPL21P24-201ENST00000413752 448 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.46□□□□□ -1.7
ERCC4Q92889 AL354751.2-201ENST00000415471 210 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC114491.1-201ENST00000416095 246 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.46□□□□□ -1.7
ERCC4Q92889 RPL21P133-201ENST00000443666 476 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 CEACAMP4-201ENST00000457676 421 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AL162395.1-201ENST00000457882 422 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RPL9P32-201ENST00000464118 620 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC010618.1-201ENST00000469924 477 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC105137.1-201ENST00000484355 562 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 TTC39CP1-201ENST00000512513 755 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 RN7SKP256-201ENST00000517201 314 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 HMGN1P28-201ENST00000521340 364 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.46□□□□□ -1.7
ERCC4Q92889 OR5B10P-201ENST00000532869 642 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.46□□□□□ -1.7
ERCC4Q92889 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.46□□□□□ -1.7
ERCC4Q92889 AC243960.4-201ENST00000600532 288 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC005034.5-201ENST00000604219 466 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC4Q92889 AC012531.5-201ENST00000611375 151 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 SNHG22-203ENST00000617833 660 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AL160413.1-201ENST00000622780 310 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 AC025034.2-201ENST00000623264 286 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 MIR3653-201ENST00000625572 110 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 MIR1302-1-201ENST00000637932 143 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ERCC4Q92889 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC4Q92889 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC4Q92889 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC4Q92889 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.46□□□□□ -1.7
ERCC4Q92889 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC4Q92889 UBE3AP2-201ENST00000429033 2259 ntBASIC4.46□□□□□ -1.7
ERCC4Q92889 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms