Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC087385.1-201ENST00000475062 312 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC026784.1-201ENST00000507986 352 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 LEF1-218ENST00000512172 598 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC105129.1-201ENST00000560250 297 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC104763.2-201ENST00000604179 382 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC010900.2-201ENST00000604508 210 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 SNHG22-203ENST00000617833 660 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC091903.1-201ENST00000624322 454 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 AC112198.2-201ENST00000426589 6996 ntBASIC8.06□□□□□ -1.12
TRIM41Q8WV44 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
TRIM41Q8WV44 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AL138885.1-201ENST00000405921 675 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AC016831.4-201ENST00000438302 307 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AL354710.1-201ENST00000453641 246 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 Y_RNA.689-201ENST00000516589 107 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 RPS29P30-201ENST00000600975 111 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AC002044.1-201ENST00000606707 158 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 ZFRP1-201ENST00000457579 2970 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 A2MP1-204ENST00000566278 4130 ntBASIC8.05□□□□□ -1.12
TRIM41Q8WV44 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM41Q8WV44 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 RAD17P1-201ENST00000418130 2042 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 RNU6-790P-201ENST00000384479 105 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 RNU2-22P-201ENST00000411266 212 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AC104333.2-201ENST00000422630 192 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 EZH2P1-201ENST00000431167 291 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 MYL8P-204ENST00000431574 518 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AP000942.1-201ENST00000463969 747 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 RNU6-27P-201ENST00000516146 107 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 RN7SKP289-201ENST00000517244 295 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 IGLVIV-65-201ENST00000517313 360 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 SARNP-203ENST00000552080 726 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 VN1R91P-201ENST00000594377 169 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AL390123.1-201ENST00000603216 237 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 IGKV2OR2-2-201ENST00000605025 300 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AC140479.6-201ENST00000633535 357 ntBASIC8.04□□□□□ -1.12
TRIM41Q8WV44 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
TRIM41Q8WV44 AL121839.2-201ENST00000565058 6943 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 ANKRD36BP1-201ENST00000358576 1779 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 Y_RNA.54-201ENST00000362766 105 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 Y_RNA.65-201ENST00000362846 100 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 Y_RNA.274-201ENST00000364714 101 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 RNA5SP22-201ENST00000365393 109 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 Y_RNA.471-201ENST00000384312 102 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 RNU6-886P-201ENST00000384319 105 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 BTF3P6-201ENST00000448054 499 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 LINC01399-202ENST00000458450 244 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 RNU1-6P-201ENST00000516290 144 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 MEG8-215ENST00000555354 469 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 MIR4433B-201ENST00000581329 102 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 MIR4273-201ENST00000582824 84 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 AC005000.2-201ENST00000605468 310 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 AL159153.1-201ENST00000619688 317 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 AC110801.1-201ENST00000623590 212 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 HSPA8P4-201ENST00000511877 1920 ntBASIC8.03□□□□□ -1.12
TRIM41Q8WV44 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM41Q8WV44 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
TRIM41Q8WV44 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
TRIM41Q8WV44 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.02□□□□□ -1.12
TRIM41Q8WV44 AC100778.3-201ENST00000580060 1750 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM41Q8WV44 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms