Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SNORA40.2-201ENST00000390847 128 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RNA5SP270-201ENST00000411361 118 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC004022.2-201ENST00000413824 193 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SSR1P2-201ENST00000415208 787 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 DPPA2P1-201ENST00000428060 556 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 HIGD1AP11-201ENST00000438361 280 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 ELOCP13-201ENST00000443934 329 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC146507.1-201ENST00000468335 354 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC093767.1-201ENST00000504523 156 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC034244.1-201ENST00000507687 207 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC108078.2-201ENST00000510750 236 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC126177.3-201ENST00000551839 688 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 LARP7P2-201ENST00000575306 125 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 SNORD39.3-201ENST00000584451 71 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 VN1R80P-201ENST00000597126 338 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC113368.1-201ENST00000603736 382 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AL158042.1-201ENST00000605338 460 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 Y_RNA.191-201ENST00000363972 113 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RNU4-28P-201ENST00000364739 141 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RNU6-224P-201ENST00000384055 107 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RPS7P9-201ENST00000414704 586 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 HMGB1P49-201ENST00000418882 569 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 MTND2P16-201ENST00000419987 799 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RPL7P54-201ENST00000438336 674 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC241584.1-201ENST00000438469 1241 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC092427.1-201ENST00000439177 601 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RPL39P6-201ENST00000448289 150 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 MTCO3P11-201ENST00000455103 774 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 ARL2BPP5-201ENST00000523141 481 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 FAM92A1P1-201ENST00000528023 890 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 HIGD1AP17-201ENST00000554576 276 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 CENPUP2-201ENST00000555897 1186 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC113194.1-201ENST00000606037 500 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 YWHAEP7-203ENST00000622054 312 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 AC231657.1-201ENST00000624313 397 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 ZNF37BP-203ENST00000452306 1352 ntBASIC2.07□□□□□ -2.08
SHROOM3Q8TF72 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RNU6-492P-201ENST00000363035 104 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RNU6-216P-201ENST00000363282 104 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RNU6-1243P-201ENST00000364028 107 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 MIR583-201ENST00000384846 75 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AL079342.2-201ENST00000403367 482 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 SEPT7P5-201ENST00000434048 306 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 USP9YP22-201ENST00000438971 294 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC104073.1-201ENST00000451988 151 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 OFD1P3Y-201ENST00000453312 783 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RPL21P131-201ENST00000497298 483 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC078918.1-201ENST00000498515 228 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 RN7SKP265-201ENST00000516448 223 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AP001189.2-201ENST00000527320 189 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC009712.1-201ENST00000564938 316 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 SNRPGP15-201ENST00000600149 222 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms