Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORA40.6-201ENST00000391153 128 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MTATP6P31-201ENST00000406985 692 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MTND4LP14-201ENST00000429447 288 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 VN1R108P-201ENST00000431580 830 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 FABP5P3-201ENST00000437960 408 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC022493.1-201ENST00000492984 337 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC084364.2-201ENST00000546924 395 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 HMGB1P51-201ENST00000605166 638 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC103710.2-202ENST00000641454 2853 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 CDC27P3-201ENST00000635418 1910 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL022400.1-201ENST00000423946 935 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC024082.2-201ENST00000434771 238 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC010301.1-201ENST00000473936 355 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 OR5BM1P-201ENST00000512021 366 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC074029.2-201ENST00000551045 634 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC015720.1-201ENST00000565251 277 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL356280.1-201ENST00000603614 379 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL137246.1-201ENST00000607072 977 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNU6-98P-201ENST00000384173 107 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPL23AP39-201ENST00000415533 405 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 OFD1P18Y-201ENST00000420889 959 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL354695.1-201ENST00000427935 228 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 snoU109.4-201ENST00000458953 143 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC034222.1-201ENST00000494052 532 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SNORA31.18-201ENST00000517043 134 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SYF2P1-201ENST00000550658 413 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC068135.2-201ENST00000569293 1028 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MTCO1P40-201ENST00000574371 625 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC079597.1-201ENST00000624306 508 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC010329.5-201ENST00000623497 2174 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 MIRLET7G-201ENST00000362280 84 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 MIR548J-201ENST00000408833 112 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL606495.1-201ENST00000422100 813 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AP000907.2-201ENST00000530827 353 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC091834.1-201ENST00000614543 472 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC008568.2-201ENST00000623862 2313 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-600P-201ENST00000362524 99 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-173P-201ENST00000364215 104 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC114786.4-201ENST00000508771 728 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC114797.1-201ENST00000514003 728 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC012493.3-201ENST00000604494 112 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC008083.4-201ENST00000615076 444 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR4G1P-203ENST00000641984 1631 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR4G1P-201ENST00000588632 938 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC136443.5-201ENST00000603741 370 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 MTND4LP5-201ENST00000605152 292 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 MTND4P23-201ENST00000447723 1363 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNA5SP457-201ENST00000363657 124 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL512504.1-201ENST00000415494 778 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-491P-201ENST00000516099 110 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 HMGN1P28-201ENST00000521340 364 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC011712.1-201ENST00000588959 234 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms