Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC004975.1-201ENST00000428733 208 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 NUTF2P7-201ENST00000453086 375 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 PMCHL2-203ENST00000457791 237 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RNU7-63P-201ENST00000459054 62 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RPS20P20-201ENST00000460498 340 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AP000873.1-201ENST00000463987 400 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC006512.1-201ENST00000468816 291 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RPS4XP22-201ENST00000480755 780 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC135721.1-201ENST00000497954 479 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 HMGN1P12-201ENST00000499125 195 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 CENPUP1-201ENST00000526649 1202 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC055876.1-202ENST00000567053 138 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 OR4K8P-201ENST00000578842 1048 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RMST_3.1-201ENST00000611651 109 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC005344.1-201ENST00000613391 459 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC004972.1-201ENST00000623934 2209 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNU6-637P-201ENST00000384050 107 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNU6-432P-201ENST00000384196 109 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNU2-41P-201ENST00000410991 178 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC245054.1-201ENST00000420944 258 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AL513185.2-201ENST00000425543 193 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RPL35AP22-201ENST00000436855 335 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RPS29P7-201ENST00000439662 171 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RPL21P133-201ENST00000443666 476 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 MTND1P11-201ENST00000456661 876 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AL133162.1-201ENST00000463228 453 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RPL23AP62-201ENST00000463396 453 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC078785.3-201ENST00000476607 425 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC078817.1-201ENST00000492623 435 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 RNU2-10P-201ENST00000516375 211 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC128657.1-201ENST00000549459 145 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 MIR4286-201ENST00000580651 93 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 SNRPGP15-201ENST00000600149 222 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 XIAPP1-201ENST00000603162 600 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC008945.2-201ENST00000606056 604 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AL121992.2-201ENST00000606262 256 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 DISC2.1-201ENST00000612827 205 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC244100.1-202ENST00000621554 382 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 MTND4P29-201ENST00000503122 1372 ntBASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP4Q8N3C7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 Y_RNA.22-201ENST00000362492 102 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 RNU6-606P-201ENST00000384721 111 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 MIR558-201ENST00000384920 94 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 RNA5SP118-201ENST00000410385 109 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 OR51A5P-201ENST00000415429 942 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 SDCBPP3-201ENST00000419629 891 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms