Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 RN7SL812P-201ENST00000493791 279 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 PARP1P2-201ENST00000556806 195 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AC007938.3-201ENST00000604965 623 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ARF4P1-201ENST00000605447 541 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 HMGN2P28-201ENST00000606102 262 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 Z98200.1-201ENST00000607298 470 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AC091925.1-201ENST00000623204 462 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AL049641.1-201ENST00000441055 1948 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 SNORD3H-201ENST00000384486 214 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-882P-201ENST00000391025 103 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-837P-201ENST00000391056 108 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 MIR921-201ENST00000401133 56 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 RPL21P91-201ENST00000429231 479 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 SNAP23P1-201ENST00000433229 246 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AL591212.2-201ENST00000433923 257 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 TXNP1-201ENST00000441872 371 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC009901.1-201ENST00000506703 541 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC079140.5-201ENST00000507882 310 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC113403.1-201ENST00000604910 193 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC083809.1-201ENST00000615051 472 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 uc_338.13-201ENST00000618243 179 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AL731566.2-201ENST00000618971 317 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 AC092608.2-201ENST00000624427 218 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM48Q8IWZ4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC074029.4-201ENST00000624796 1859 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.5-201ENST00000362334 102 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.148-201ENST00000363557 117 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 SNORA70.2-201ENST00000364506 135 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1303P-201ENST00000364841 107 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1105P-201ENST00000384774 107 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1106P-201ENST00000390845 107 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AL160275.3-201ENST00000423876 471 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RPL7P37-201ENST00000425095 738 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC079780.1-201ENST00000428259 207 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AL132765.1-201ENST00000434165 553 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 DHFRP3-201ENST00000455595 559 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RPL21P103-201ENST00000479921 488 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms