Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-1060P-201ENST00000384664 107 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 MT-TD-201ENST00000387419 68 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 HMGN2P8-201ENST00000391458 268 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.615-201ENST00000410769 117 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-1148P-201ENST00000410992 104 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 BX323014.1-201ENST00000412876 237 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC009161.1-201ENST00000417306 376 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 PDCL2P1-201ENST00000419302 352 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 ERLEC1P1-201ENST00000433806 578 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 RPS29P33-201ENST00000456717 146 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 SNRPFP3-201ENST00000457792 225 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 RNU7-180P-201ENST00000459240 63 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC010285.1-201ENST00000470580 392 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AL049830.2-201ENST00000480072 201 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 BTF3P12-201ENST00000519620 469 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC107953.1-201ENST00000522216 297 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 ERHP1-201ENST00000523006 310 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AP006587.4-201ENST00000526053 529 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 BNIP3P6-201ENST00000549284 499 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 TVP23BP1-201ENST00000557500 617 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC022968.1-201ENST00000567372 442 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC005951.2-201ENST00000576282 495 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 SDR42E1P2-201ENST00000614861 481 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC010133.1-201ENST00000615809 842 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC009248.2-201ENST00000619826 254 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 PLCE1P1-201ENST00000622094 305 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC005858.4-201ENST00000623191 700 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AL359697.1-201ENST00000624879 587 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 MTND4P14-201ENST00000435799 1354 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 SNORD81.2-201ENST00000365153 76 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.529-201ENST00000384586 119 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 U3.22-201ENST00000391120 215 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC011933.1-201ENST00000413334 321 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 RPL7P46-201ENST00000425129 740 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 RPL35AP12-201ENST00000425362 338 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC006011.1-201ENST00000442758 349 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 FABP5P13-201ENST00000452144 328 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 U3.44-201ENST00000458938 192 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 snoU13.1-201ENST00000459157 104 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC116533.1-201ENST00000459748 321 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 RN7SL93P-201ENST00000463035 293 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC011276.1-201ENST00000469688 323 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC110792.1-201ENST00000491826 472 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 RPS27AP13-201ENST00000498403 237 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 VN1R104P-201ENST00000505115 1009 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 MLLT10P2-201ENST00000506434 249 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 RBBP4P6-201ENST00000508098 202 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 FAM60BP-201ENST00000578364 658 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 MIR5583-1-201ENST00000580941 59 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 MIR4424-201ENST00000585257 86 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 DPPA3P3-201ENST00000603842 430 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC007619.2-201ENST00000605743 379 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AC112487.2-201ENST00000637950 304 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 AL137003.2-201ENST00000606924 2538 ntBASIC3.67□□□□□ -1.82
PTCHD4Q6ZW05 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.11-201ENST00000362375 109 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms