Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MIR3690-201ENST00000580266 75 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC113368.1-201ENST00000603736 382 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC034236.3-201ENST00000605999 461 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AL161734.1-201ENST00000609720 557 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 uc_338.20-201ENST00000621563 178 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 MTND4P31-201ENST00000425607 1343 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 MIR17-201ENST00000385012 84 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC098592.2-201ENST00000413158 265 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC234775.1-201ENST00000454247 670 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC093852.1-201ENST00000503587 266 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 MTND2P17-201ENST00000550281 688 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 AC110792.3-201ENST00000595906 1614 ntBASIC0.96□□□□□ -2.26
CSPG4Q6UVK1 SUMO2P12-201ENST00000405924 140 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC008850.1-201ENST00000427546 362 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AL596276.1-201ENST00000434465 418 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 DPPA3P1-201ENST00000448050 469 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC010928.2-201ENST00000588017 287 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC140725.3-201ENST00000616193 880 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC099654.7-201ENST00000635788 2127 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 SNORA7.2-201ENST00000364446 145 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 RNA5SP465-201ENST00000391195 109 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 RPS23P3-201ENST00000470993 430 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC092902.1-201ENST00000486999 259 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 MIR7974-201ENST00000615835 79 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 MIR6513-201ENST00000621188 64 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 RNF6P1-201ENST00000444889 1784 ntBASIC0.95□□□□□ -2.26
CSPG4Q6UVK1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC093752.1-206ENST00000511823 336 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 RNA5SP384-201ENST00000516615 116 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 RNU6-943P-201ENST00000516960 98 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 RNU1-104P-201ENST00000517280 175 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 MTND2P13-201ENST00000577438 1039 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC090897.2-201ENST00000581715 130 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 SNRPGP15-201ENST00000600149 222 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC111188.2-201ENST00000529697 1387 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 RNU6-50P-201ENST00000362356 103 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 TRGV6-201ENST00000417928 299 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 OR5H4P-201ENST00000510851 923 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 OR4R1P-201ENST00000529879 463 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 AL445493.3-201ENST00000619568 477 ntBASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
CSPG4Q6UVK1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 RPL30P4-201ENST00000429309 333 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 RPL17P49-201ENST00000443728 411 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC110792.2-201ENST00000510278 224 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AL133507.1-201ENST00000605269 557 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC123912.5-201ENST00000605470 343 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 uc_338.9-201ENST00000617424 182 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC006249.1-201ENST00000621223 471 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC116618.1-201ENST00000634617 774 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 SNORA51.2-201ENST00000364595 132 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 TATDN1P1-201ENST00000414123 891 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 HMGB1P49-201ENST00000418882 569 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 GPM6BP3-201ENST00000442797 145 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC146507.1-201ENST00000468335 354 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 BZW1P2-201ENST00000473537 826 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC104685.1-201ENST00000502445 371 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 MTND3P24-201ENST00000506306 329 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms