Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL450336.1-201ENST00000605180 586 ntBASIC1.79□□□□□ -2.12
CCDC171Q6TFL3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCDC171Q6TFL3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC171Q6TFL3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 MIR767-201ENST00000390228 109 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 SNORA67.6-201ENST00000391093 99 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 SSXP10-201ENST00000402595 565 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 HMGB3P31-201ENST00000413333 595 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL445183.3-201ENST00000414168 502 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 RPS7P9-201ENST00000414704 586 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL513185.2-201ENST00000425543 193 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL360221.1-201ENST00000445989 335 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL627224.1-201ENST00000448334 444 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 PNPLA4P1-201ENST00000458328 305 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AC021087.2-201ENST00000504656 1203 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 RPS3AP4-201ENST00000555161 764 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 HMGB1P14-201ENST00000557424 591 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AC090888.1-201ENST00000561335 1141 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AC010615.3-201ENST00000597319 394 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL109918.3-201ENST00000603072 338 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
CCDC171Q6TFL3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
CCDC171Q6TFL3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC098614.2-201ENST00000426040 255 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AL354695.1-201ENST00000427935 228 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC117525.1-201ENST00000515228 503 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 FAM60BP-201ENST00000578364 658 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AP006248.3-201ENST00000623580 594 ntBASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC171Q6TFL3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC004520.1-201ENST00000608362 1413 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 NUP58P1-201ENST00000502546 1738 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 U8.3-201ENST00000363321 132 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 PTGES3P2-201ENST00000407942 482 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 RNU6-174P-201ENST00000410406 106 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 RNU6-712P-201ENST00000410558 100 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 TATDN1P1-201ENST00000414123 891 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AP1B1P2-201ENST00000416196 106 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 Z82205.1-201ENST00000428456 297 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC022447.3-201ENST00000506865 495 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC096745.1-201ENST00000509945 370 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 MRPS36P2-201ENST00000512569 299 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC002487.1-201ENST00000604565 994 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC135507.1-201ENST00000607214 561 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 AC013468.1-201ENST00000608680 598 ntBASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC171Q6TFL3 RPL36P19-201ENST00000430744 301 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 RNU7-95P-201ENST00000459222 64 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 AC025181.1-201ENST00000477507 416 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 FO393415.2-201ENST00000480085 343 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 AC104057.1-201ENST00000515547 497 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 AC130650.2-201ENST00000618736 2403 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 MTND5P10-201ENST00000603719 1809 ntBASIC1.75□□□□□ -2.13
CCDC171Q6TFL3 RNU6-821P-201ENST00000390995 107 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 RPL7P29-201ENST00000437151 728 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 HMGB1P31-201ENST00000437242 427 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC005297.2-201ENST00000450430 606 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 MTATP6P7-201ENST00000453315 681 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC107398.1-201ENST00000486904 505 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AP005902.1-201ENST00000521358 186 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 EIF4EP5-201ENST00000528228 640 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 SUB1P3-201ENST00000564581 315 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC011260.1-201ENST00000578420 472 ntBASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC171Q6TFL3 AC040174.2-201ENST00000602701 465 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms