Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 SNORD3H-201ENST00000384486 214 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 MIR323B-201ENST00000385269 82 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 RNA5SP332-201ENST00000391063 115 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 SNORA11F-201ENST00000408237 128 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 EIF4A1P3-201ENST00000411521 244 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 RPL7AP73-201ENST00000413490 353 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.55□□□□□ -1.68
E4F1Q66K89 FABP5P14-201ENST00000437273 393 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.55□□□□□ -1.68
E4F1Q66K89 AL162388.1-201ENST00000450912 352 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.55□□□□□ -1.68
E4F1Q66K89 RPL30P15-201ENST00000457129 321 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.55□□□□□ -1.68
E4F1Q66K89 AL163540.1-201ENST00000485382 386 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 RN7SL691P-201ENST00000494487 301 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AP002812.1-201ENST00000495378 474 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
E4F1Q66K89 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.55□□□□□ -1.68
E4F1Q66K89 RNU6-677P-201ENST00000516914 101 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
E4F1Q66K89 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.55□□□□□ -1.68
E4F1Q66K89 AC023043.2-201ENST00000589678 1026 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AC016925.2-201ENST00000605108 242 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.55□□□□□ -1.68
E4F1Q66K89 SDR42E1P2-201ENST00000614861 481 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AL359547.2-201ENST00000615810 418 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 uc_338.13-201ENST00000618243 179 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 AC244517.12-201ENST00000623581 663 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
E4F1Q66K89 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
E4F1Q66K89 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
E4F1Q66K89 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
E4F1Q66K89 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
E4F1Q66K89 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
E4F1Q66K89 Y_RNA.212-201ENST00000364177 102 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 SNORD116-11-201ENST00000383882 92 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 Y_RNA.422-201ENST00000384054 114 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 SNORA16.2-201ENST00000390991 127 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AL583834.1-201ENST00000406943 343 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AL356387.2-201ENST00000422272 243 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 FAR2P4-202ENST00000425399 584 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 Y_RNA.653-201ENST00000459091 95 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.54□□□□□ -1.68
E4F1Q66K89 MIR2114-201ENST00000516645 80 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 RNU6-352P-201ENST00000516908 107 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 RNA5SP143-201ENST00000516936 115 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 Y_RNA.711-201ENST00000516993 102 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AC067852.3-201ENST00000589177 561 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.54□□□□□ -1.68
E4F1Q66K89 XIAPP1-201ENST00000603162 600 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AC104763.2-201ENST00000604179 382 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 AL355802.3-201ENST00000607571 545 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.54□□□□□ -1.68
E4F1Q66K89 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 Mico1.1-201ENST00000611698 204 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 MIR486-1-201ENST00000612171 68 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 AP005019.3-201ENST00000620418 560 ntBASIC4.54□□□□□ -1.68
E4F1Q66K89 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
E4F1Q66K89 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
E4F1Q66K89 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
E4F1Q66K89 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
E4F1Q66K89 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
E4F1Q66K89 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.53□□□□□ -1.68
E4F1Q66K89 RNA5SP502-201ENST00000362694 119 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 SNORA63C-201ENST00000364578 129 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RNU6-715P-201ENST00000365204 103 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.53□□□□□ -1.68
E4F1Q66K89 RNU6-601P-201ENST00000384540 107 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RNU6-1160P-201ENST00000384546 104 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RNU6-882P-201ENST00000391025 103 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RNA5SP36-201ENST00000410197 133 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.53□□□□□ -1.68
E4F1Q66K89 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
E4F1Q66K89 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.53□□□□□ -1.68
E4F1Q66K89 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.53□□□□□ -1.68
E4F1Q66K89 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
E4F1Q66K89 RNU7-152P-201ENST00000458982 64 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RN7SL98P-201ENST00000462271 300 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 BTF3L4P4-201ENST00000506381 449 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.53□□□□□ -1.68
E4F1Q66K89 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.53□□□□□ -1.68
E4F1Q66K89 RN7SKP60-201ENST00000516985 239 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.53□□□□□ -1.68
E4F1Q66K89 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.53□□□□□ -1.68
E4F1Q66K89 IMMP1LP2-201ENST00000552954 492 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 AC090115.3-201ENST00000553218 849 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.53□□□□□ -1.68
E4F1Q66K89 MIR3941-201ENST00000582572 103 ntBASIC4.53□□□□□ -1.68
E4F1Q66K89 MIR5690-201ENST00000583739 73 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms