Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SNRPFP3-201ENST00000457792 225 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RPL23AP14-201ENST00000468281 468 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC084357.1-201ENST00000473404 255 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RPL7P47-201ENST00000497299 556 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 SNORA70.14-201ENST00000516205 110 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RNU6-914P-201ENST00000516749 109 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC022690.1-201ENST00000526681 550 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AL138889.2-201ENST00000603883 242 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 MIR15A-201ENST00000607334 83 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 DISC2.1-201ENST00000612827 205 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AL390240.1-201ENST00000612950 384 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC079684.1-201ENST00000621405 437 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC024940.5-201ENST00000622889 474 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RNF220Q5VTB9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF220Q5VTB9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF220Q5VTB9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 RNU6-116P-201ENST00000384042 109 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 CISD1P1-201ENST00000393907 327 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AL354719.1-201ENST00000406535 843 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 RPL37P18-201ENST00000411602 243 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 SNRPEP10-201ENST00000420249 274 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AL592045.1-201ENST00000429867 352 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 MTND1P2-201ENST00000430604 821 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 GPM6BP2-201ENST00000432046 144 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 CALM1P1-201ENST00000442082 433 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 RPS24P13-201ENST00000442520 397 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 GPM6BP1-201ENST00000446387 144 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 TRBV1-201ENST00000476502 284 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 SNORD60.2-201ENST00000516883 86 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 HIF1AP1-201ENST00000553642 175 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AL133241.1-201ENST00000556832 487 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 NRBF2P5-201ENST00000603087 788 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AL356218.2-201ENST00000605264 187 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 RNVU1-4-201ENST00000612985 164 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AP000346.3-201ENST00000622821 210 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 AC066616.2-201ENST00000559334 1481 ntBASIC3.83□□□□□ -1.8
RNF220Q5VTB9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RNF220Q5VTB9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 NACAP2-201ENST00000318548 624 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RPL7P26-201ENST00000333817 754 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RNA5SP509-201ENST00000364577 119 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 SNORA1.3-201ENST00000384676 136 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 SNORD37.1-201ENST00000390968 65 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AL136116.1-201ENST00000403591 381 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RNU4-25P-201ENST00000410569 230 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC011933.1-201ENST00000413334 321 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC245028.1-201ENST00000423259 256 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RPL23AP69-201ENST00000431134 458 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 ATP5JP1-201ENST00000431631 322 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AL591704.1-201ENST00000432574 275 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC116533.1-201ENST00000459748 321 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC136601.2-201ENST00000604356 474 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC104662.1-201ENST00000604448 511 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms