Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 MIR3944-201ENST00000581277 108 ntBASIC4.26□□□□□ -1.73
USP39Q53GS9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.26□□□□□ -1.73
USP39Q53GS9 NUTF2P8-201ENST00000604593 363 ntBASIC4.26□□□□□ -1.73
USP39Q53GS9 AC092807.2-201ENST00000609367 243 ntBASIC4.26□□□□□ -1.73
USP39Q53GS9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.26□□□□□ -1.73
USP39Q53GS9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP39Q53GS9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP39Q53GS9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP39Q53GS9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP39Q53GS9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
USP39Q53GS9 HSPE1P11-201ENST00000339579 310 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 Y_RNA.5-201ENST00000362334 102 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 RNY3P13-201ENST00000365542 102 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 MIR558-201ENST00000384920 94 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AL606923.1-201ENST00000406616 190 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 RPL37P10-201ENST00000412884 288 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC074085.1-201ENST00000413598 418 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AL590233.1-201ENST00000430017 456 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.25□□□□□ -1.73
USP39Q53GS9 Z98949.2-201ENST00000440996 144 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 SNRPGP5-201ENST00000456003 220 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP39Q53GS9 PPBPP1-201ENST00000510807 373 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 RNU6-566P-201ENST00000516790 107 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 OR4P1P-201ENST00000530808 1136 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AP000857.1-201ENST00000532151 543 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.25□□□□□ -1.73
USP39Q53GS9 IMMP1LP2-201ENST00000552954 492 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.25□□□□□ -1.73
USP39Q53GS9 AC026470.2-201ENST00000561492 181 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC008269.2-201ENST00000561915 1105 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 RN7SL703P-201ENST00000578485 302 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC060771.1-201ENST00000582031 164 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC005255.1-201ENST00000593748 216 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC068790.3-201ENST00000602988 553 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AC005014.2-201ENST00000607795 599 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 U4.1-201ENST00000620349 87 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 AL159972.1-201ENST00000625150 448 ntBASIC4.25□□□□□ -1.73
USP39Q53GS9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP39Q53GS9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP39Q53GS9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP39Q53GS9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
USP39Q53GS9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.24□□□□□ -1.73
USP39Q53GS9 AC097714.1-201ENST00000511272 1647 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USP39Q53GS9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USP39Q53GS9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USP39Q53GS9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
USP39Q53GS9 MTND5P10-201ENST00000603719 1809 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 RNU1-15P-201ENST00000353977 144 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 Y_RNA.158-201ENST00000363651 101 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 Y_RNA.234-201ENST00000364409 97 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 Y_RNA.378-201ENST00000365652 113 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 RNU11-4P-201ENST00000391149 133 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 SSXP10-201ENST00000402595 565 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AL024474.1-201ENST00000404655 591 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 MIR1302-3-201ENST00000408128 138 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.24□□□□□ -1.73
USP39Q53GS9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AL160004.2-201ENST00000432935 350 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.24□□□□□ -1.73
USP39Q53GS9 FABP5P14-201ENST00000437273 393 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP39Q53GS9 RPL21P23-201ENST00000446654 460 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC020550.1-201ENST00000447385 163 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 MTND1P9-201ENST00000453775 944 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 BTF3P15-201ENST00000455606 336 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 TRBV26-201ENST00000456572 344 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC126389.1-201ENST00000477436 290 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.24□□□□□ -1.73
USP39Q53GS9 RN7SKP24-201ENST00000515888 284 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 RNU6-273P-201ENST00000516937 96 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC109635.4-202ENST00000531666 412 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 LSM6P2-201ENST00000552208 177 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 MIR5685-201ENST00000579080 79 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.24□□□□□ -1.73
USP39Q53GS9 AL592436.1-201ENST00000605135 558 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC022893.3-201ENST00000607665 437 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.24□□□□□ -1.73
USP39Q53GS9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.24□□□□□ -1.73
USP39Q53GS9 CR392039.5-201ENST00000623201 510 ntBASIC4.24□□□□□ -1.73
USP39Q53GS9 AC022418.1-201ENST00000624118 445 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms