Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 HMGB1P14-201ENST00000557424 591 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC087499.8-201ENST00000578406 226 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC007363.1-201ENST00000604736 620 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 SNORA50A-202ENST00000629536 136 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AL732372.2-225ENST00000642124 456 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC022336.2-201ENST00000568966 2538 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC38Q502W7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU1-75P-201ENST00000347264 129 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-181P-201ENST00000363225 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-188P-201ENST00000364207 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-282P-201ENST00000365357 103 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-108P-201ENST00000365558 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AL359837.1-201ENST00000381357 287 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 MIR134-201ENST00000385258 73 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-817P-201ENST00000391083 104 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RPL21P17-201ENST00000397467 475 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU2-39P-201ENST00000410604 198 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-55P-201ENST00000411092 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-954P-201ENST00000411355 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AL139247.1-201ENST00000422768 325 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 RPL37P6-201ENST00000460682 294 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC010401.1-201ENST00000463867 348 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 KC877373.1-201ENST00000479066 408 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC007182.2-201ENST00000489251 402 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 MTND2P33-201ENST00000506452 1031 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC006445.2-201ENST00000510061 472 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC091133.4-201ENST00000511142 308 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC010493.1-201ENST00000513479 292 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-445P-201ENST00000516949 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNU6-410P-201ENST00000517006 107 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 RNA5SP380-201ENST00000517190 98 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 CYCSP30-201ENST00000546447 172 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 NCAPGP2-201ENST00000557911 754 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC010546.1-201ENST00000569391 485 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 MIR3609-201ENST00000582661 80 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC098848.2-201ENST00000588023 330 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC078795.2-201ENST00000602835 1252 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC174048.1-201ENST00000603389 144 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AL136363.2-201ENST00000604173 851 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AL365204.3-201ENST00000612448 685 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 AL138880.2-201ENST00000616214 239 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC38Q502W7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC38Q502W7 AC006111.3-201ENST00000622137 383 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 LRRC77P-213ENST00000637727 880 ntBASIC3.75□□□□□ -1.81
CCDC38Q502W7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CCDC38Q502W7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC38Q502W7 Y_RNA.22-201ENST00000362492 102 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 RNU6-946P-201ENST00000383878 107 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 RNU6-259P-201ENST00000383999 107 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 MIR591-201ENST00000385290 95 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 SNORA48.7-201ENST00000391302 135 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AL139397.2-201ENST00000404529 772 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC104651.1-201ENST00000427559 735 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC093106.2-201ENST00000428212 385 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC125238.1-201ENST00000448842 249 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC132479.1-201ENST00000449160 144 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 RNU6-953P-201ENST00000459154 107 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC082651.2-201ENST00000496833 166 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC023632.4-201ENST00000517783 191 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms