Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC013444.2-201ENST00000603317 787 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AL078605.1-201ENST00000603529 500 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC068276.1-201ENST00000605793 379 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AL592148.2-201ENST00000612210 372 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 MTND5P29-201ENST00000458676 1807 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 Y_RNA.510-201ENST00000384511 114 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 RNU6-1151P-201ENST00000384684 107 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 MIR218-1-201ENST00000384999 110 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 MIR325-201ENST00000385260 98 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 SNORA3.2-201ENST00000408221 125 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 RN7SKP192-201ENST00000411291 327 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 POLHP1-201ENST00000411806 470 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 EDDM3CP-201ENST00000415977 425 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 HMGB1P49-201ENST00000418882 569 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 OR10R1P-201ENST00000441524 1141 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 RAB11AP1-201ENST00000442978 646 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 RPL7P36-201ENST00000444633 681 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AL592447.1-201ENST00000447592 540 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 SNORD121B-201ENST00000458838 81 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC015724.1-201ENST00000478577 156 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 GNAI2P1-201ENST00000541815 315 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AL391261.3-201ENST00000557194 520 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 MTCO3P22-201ENST00000603219 784 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 uc_338.5-201ENST00000611839 155 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC064859.1-201ENST00000624741 174 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 AC130650.2-201ENST00000618736 2403 ntBASIC1.48□□□□□ -2.17
CCDC58Q4VC31 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCDC58Q4VC31 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AL049641.1-201ENST00000441055 1948 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AL079342.1-201ENST00000401460 267 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AL589655.1-201ENST00000405398 482 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC023141.4-201ENST00000412031 328 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 RPL7P54-201ENST00000438336 674 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 UBE2V1P5-201ENST00000440070 405 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 RAC1P7-201ENST00000445367 377 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 DDX3P2-201ENST00000446138 111 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC005410.1-202ENST00000460347 485 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC017037.2-201ENST00000513850 890 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC110588.1-201ENST00000559699 137 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC074050.1-201ENST00000563247 211 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 HMGN2P15-201ENST00000585707 270 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AL137246.1-201ENST00000607072 977 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC010678.1-201ENST00000614118 713 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AC091304.6-201ENST00000619761 202 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 IGHVIII-44-202ENST00000636235 289 ntBASIC1.47□□□□□ -2.17
CCDC58Q4VC31 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC58Q4VC31 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 RNU6-673P-201ENST00000365084 104 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 RNA5SP450-201ENST00000411206 102 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC009237.2-201ENST00000421358 284 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 HMGN1P8-201ENST00000463578 288 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AL049873.1-201ENST00000480540 376 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC109464.2-201ENST00000510242 943 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 LTV1P1-201ENST00000510683 1237 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC084851.1-201ENST00000529105 249 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 TRAV11-201ENST00000539512 339 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC011374.2-201ENST00000607135 526 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC090132.2-201ENST00000615881 347 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC090772.4-201ENST00000623599 362 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 AC104454.1-201ENST00000421341 1401 ntBASIC1.46□□□□□ -2.18
CCDC58Q4VC31 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CCDC58Q4VC31 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 RNU1-72P-201ENST00000362976 153 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms